chr7 : 124,261,705 – 124,262,560

855 bp 68 TFs 0 linked genes

This 855 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

68 transcription factors

BARX1 1 dataset

Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap

BRD4 2 datasets

ChIP MM1-S GSE43743.BRD4.MM1-S 226 bp overlap

ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 346 bp overlap

BSX 1 dataset

Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap

CEBPB 2 datasets

ChIP H1 ENCFF871PTR 261 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 204 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 215 bp overlap

DLX1 1 dataset

Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap

EN2 1 dataset

Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 457 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 415 bp overlap

ChIP DE DE-FOXA2-2 73 bp overlap

ChIP DE DE-FOXA2-2 387 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 366 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 441 bp overlap

ChIP DE DE-GATA4-2 647 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 534 bp overlap

ChIP DE DE-GATA6-2 730 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 761 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 747 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 855 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 662 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 855 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 855 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 371 bp overlap

GBX1 1 dataset

Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap

GBX2 1 dataset

Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap

HAND2 1 dataset

Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap

HESX1 1 dataset

Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap

LBX1 1 dataset

Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap

LBX2 1 dataset

Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap

LHX9 1 dataset

Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

MSX1 1 dataset

Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap

MYB 1 dataset

ChIP Loucy GSE94000.MYB.Loucy 290 bp overlap

Msx3 1 dataset

Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 335 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 273 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 222 bp overlap

NEUROD1 1 dataset

Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap

NR1H2::RXRA 1 dataset

Motif DE_36h DE_36h-NR1H2RXRA_MA0115.1 17 bp overlap

NR1I3 1 dataset

Motif DE_36h DE_36h-NR1I3_MA1534.2 8 bp overlap

NR2C2 1 dataset

Motif DE_36h DE_36h-NR2C2_MA0504.2 14 bp overlap

NR2F1 1 dataset

Motif DE_36h DE_36h-NR2F1_MA1537.2 13 bp overlap

Neurod2 1 dataset

Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap

Nobox 1 dataset

Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap

Nr2f6 1 dataset

Motif DE_36h DE_36h-Nr2f6_MA0677.2 13 bp overlap

ONECUT1 2 datasets

ChIP H9 ERP004206.ONECUT1.H9 203 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 325 bp overlap

PAX6 1 dataset

Motif DE_36h DE_36h-PAX6_MA0069.1 14 bp overlap

PHOX2A 1 dataset

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

POU1F1 1 dataset

Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap

POU2F2 1 dataset

Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap

POU3F2 1 dataset

Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 470 bp overlap

PPARA::RXRA 1 dataset

Motif DE_36h DE_36h-PPARARXRA_MA1148.2 17 bp overlap

PPARD 1 dataset

Motif DE_36h DE_36h-PPARD_MA1550.2 14 bp overlap

PRRX2 1 dataset

Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap

Pparg::Rxra 1 dataset

Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap

Ptf1A 1 dataset

Motif DE_36h DE_36h-Ptf1A_MA1618.2 9 bp overlap

RAX 1 dataset

Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap

REST 1 dataset

ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 129 bp overlap

RXRB 1 dataset

Motif DE_36h DE_36h-RXRB_MA0855.1 14 bp overlap

RXRG 1 dataset

Motif DE_36h DE_36h-RXRG_MA0856.1 14 bp overlap

Rhox11 1 dataset

Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap

Rxra 1 dataset

Motif DE_36h DE_36h-Rxra_MA0512.2 14 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 341 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 546 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 579 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 289 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 296 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 211 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX2 2 datasets

ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 159 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 222 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 273 bp overlap

THRB 1 dataset

Motif DE_36h DE_36h-THRB_MA1574.2 13 bp overlap

TP53 1 dataset

ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 128 bp overlap

ZNF530 2 datasets

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap

ZNF558 1 dataset

Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap