chr7 : 78,398,663 78,398,913
250 bp 104 TFs 0 linked genes
This 250 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:78,393,663 – 78,403,913
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
ARGFX 1 dataset
Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap
CTCF 4 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 155 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 205 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 219 bp overlap
DRGX 1 dataset
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
EMX1 1 dataset
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
ESX1 1 dataset
Motif DE_12h DE_12h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 250 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 250 bp overlap
GSX1 1 dataset
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap
HOXA1 1 dataset
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
Hmga1 1 dataset
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
IRF4 1 dataset
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
ISX 1 dataset
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 198 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
LHX5 1 dataset
Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap
LMX1A 1 dataset
Motif DE_12h DE_12h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_12h DE_12h-LMX1B_MA0703.3 8 bp overlap
Lhx4 1 dataset
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEOX1 1 dataset
Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 241 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCFF065NZG 250 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 250 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 250 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 250 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 250 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 250 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NKX6-1 1 dataset
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 1 dataset
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_12h DE_12h-NOTO_MA0710.2 7 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nkx2-1 1 dataset
Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap
PDX1 1 dataset
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 231 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
PRDM14 2 datasets
ChIP hESC GSE22767.PRDM14.hESC 250 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 246 bp overlap
PRRX1 1 dataset
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RAX2 1 dataset
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 206 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
SHOX 1 dataset
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 203 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 249 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 174 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 250 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 210 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Shox2 1 dataset
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
THRA 1 dataset
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
TLX2 1 dataset
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_12h DE_12h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_12h DE_12h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_12h DE_12h-VSX2_MA0726.2 7 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
mix-a 1 dataset
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap