chr7 : 11,315,243 – 11,316,461

1,218 bp 97 TFs 0 linked genes

This 1.2 kb open chromatin element has no linked target genes and is bound by 97 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

97 transcription factors

ATOH7 1 dataset

Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap

Atoh1 1 dataset

Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap

BARX1 1 dataset

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

BCL6 1 dataset

ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 203 bp overlap

BSX 1 dataset

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 466 bp overlap

CTCF 1 dataset

ChIP islet GSE23784.CTCF.islet 95 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 338 bp overlap

DLX1 1 dataset

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

Ddit3::Cebpa 1 dataset

Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap

Dlx2 1 dataset

Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap

FOXE1 1 dataset

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

GATA2 1 dataset

ChIP WA09 GSE105081.GATA2.WA09 135 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 406 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 541 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 538 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 713 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 591 bp overlap

GBX2 1 dataset

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

HAND2 2 datasets

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 159 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 212 bp overlap

HESX1 1 dataset

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

HIF1A 1 dataset

ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 280 bp overlap

HNF4A 1 dataset

Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap

HNF4G 1 dataset

Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap

HOXA6 1 dataset

Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap

HOXA7 1 dataset

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

HOXB6 1 dataset

Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap

HOXB7 1 dataset

Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap

HOXB8 1 dataset

Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap

HOXD3 1 dataset

Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap

HOXD8 1 dataset

Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap

ISL2 1 dataset

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 259 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 547 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 488 bp overlap

LBX2 1 dataset

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

MEF2B 3 datasets

ChIP DOHH2 GSE69558.MEF2B.DOHH2 158 bp overlap

ChIP KARPAS422 GSE69558.MEF2B.KARPAS422 292 bp overlap

ChIP tonsil GSE110682.MEF2B.tonsil 286 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MITF 4 datasets

ChIP 501-mel GSE137522.MITF.501-mel 481 bp overlap

ChIP 501-mel GSE61965.MITF.501-mel 246 bp overlap

ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 404 bp overlap

ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 412 bp overlap

MSX1 1 dataset

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

Msgn1 1 dataset

Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap

Msx3 1 dataset

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 260 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 672 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 236 bp overlap

NEUROD1 1 dataset

Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 2 datasets

Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap

Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap

NFIB 1 dataset

Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap

NFIC 1 dataset

Motif DE_12h DE_12h-NFIC_MA1527.2 15 bp overlap

NFIC::TLX1 1 dataset

Motif DE_12h DE_12h-NFICTLX1_MA0119.1 14 bp overlap

NFIX 1 dataset

Motif DE_12h DE_12h-NFIX_MA1528.2 14 bp overlap

NFKB1 1 dataset

Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 214 bp overlap

NKX2-3 1 dataset

Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap

NR3C1 1 dataset

ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 204 bp overlap

Nanog 1 dataset

Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap

Nkx3-1 1 dataset

Motif DE_12h DE_12h-Nkx3-1_MA0124.3 7 bp overlap

Nkx3-2 1 dataset

Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap

Nobox 1 dataset

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

PAX2 1 dataset

Motif DE_12h DE_12h-PAX2_MA0067.3 16 bp overlap

PKNOX1 3 datasets

Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap

ChIP GM12878 ENCFF589FCY 437 bp overlap

ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 307 bp overlap

POLR2A 1 dataset

ChIP GM12891 ENCFF012SUT 565 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU5F1 3 datasets

ChIP NCCIT GSE36134.POU5F1.NCCIT 308 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 496 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 497 bp overlap

Pou5f1::Sox2 2 datasets

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm4 1 dataset

Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap

RAX 1 dataset

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

RBPJ 1 dataset

ChIP LCL GSE75503.RBPJ.LCL 243 bp overlap

Runx1 1 dataset

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

SIX1 1 dataset

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

SIX2 1 dataset

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 1002 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 655 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 523 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 611 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 536 bp overlap

SMARCA4 4 datasets

ChIP NSC GSE125033.SMARCA4.NSC 544 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 337 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 250 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 321 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 334 bp overlap

SOX2 3 datasets

ChIP HNSC GSE69479.SOX2.HNSC 342 bp overlap

ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 249 bp overlap

ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 237 bp overlap

SOX21 1 dataset

Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SUZ12 2 datasets

ChIP H1 ENCFF507HGF 271 bp overlap

ChIP WA01 ENCSR000EUQ.SUZ12.WA01 218 bp overlap

Sox1 1 dataset

Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 238 bp overlap

TAL1::TCF3 1 dataset

Motif DE_12h DE_12h-TAL1TCF3_MA0091.2 10 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

TP53 1 dataset

ChIP H9 GSE142050.TP53.H9 269 bp overlap

USF1 3 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 150 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 239 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 417 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

ZBTB6 1 dataset

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

ZFP42 1 dataset

Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap

ZNF300 1 dataset

ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap

ZNF680 2 datasets

ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 285 bp overlap

ChIP HEK293 GSE76494.ZNF680.HEK293 227 bp overlap

ZNF766 1 dataset

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap