chr1 : 144,104,229 144,104,684
455 bp 52 TFs 0 linked genes
This 455 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:144,099,229 – 144,109,684
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AR 2 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 260 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 160 bp overlap
ARNTL 1 dataset
ChIP U2OS_cordycepin GSE130506.ARNTL.U2OS_cordycepin 315 bp overlap
BRD4 5 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 218 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 265 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 146 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 455 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 397 bp overlap
CBFB 2 datasets
ChIP K562 ENCFF145YWG 317 bp overlap
ChIP ME-1 GSE46044.CBFB.ME-1 455 bp overlap
Cebpa 6 datasets
ChIP BLaER1 ENCFF031ISE 443 bp overlap
ChIP BLaER1 ENCFF262VBH 226 bp overlap
ChIP BLaER1 ENCFF274GAT 251 bp overlap
ChIP BLaER1 ENCFF335XTP 455 bp overlap
ChIP BLaER1 ENCFF364PUR 245 bp overlap
ChIP BLaER1 ENCFF460KDD 244 bp overlap
E2F4 1 dataset
ChIP WTC11 ENCFF574OKJ 223 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 70 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 336 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 284 bp overlap
ESR1 6 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 381 bp overlap
ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 157 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 209 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 335 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 411 bp overlap
ChIP MCF-7_shCTRL GSE132432.ESR1.MCF-7_shCTRL 172 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 363 bp overlap
FOXP4 2 datasets
ChIP WTC11 ENCFF708TAF 250 bp overlap
ChIP WTC11 ENCFF708TAF 355 bp overlap
GATA6 1 dataset
ChIP AGS GSE51936.GATA6.AGS 90 bp overlap
GRHL2 2 datasets
ChIP MCF-7 GSE99680.GRHL2.MCF-7 104 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 331 bp overlap
GTF2F1 2 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 153 bp overlap
ChIP K-562 GSE120104.GTF2F1.K-562 153 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 455 bp overlap
HMGN3 1 dataset
ChIP K-562 ENCSR000DOB.HMGN3.K-562 169 bp overlap
HNRNPC 1 dataset
ChIP Hep-G2 GSE120104.HNRNPC.Hep-G2 260 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 172 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 172 bp overlap
JUN 1 dataset
ChIP WTC11 ENCFF172UDA 361 bp overlap
MYC 1 dataset
ChIP MCF-7 ENCFF394LGD 184 bp overlap
NR1H2 1 dataset
ChIP WTC11 ENCFF386FJZ 350 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 341 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 246 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF385PDC 95 bp overlap
PCBP1 1 dataset
ChIP K-562 GSE120104.PCBP1.K-562 180 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 252 bp overlap
POU5F1 2 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 110 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 191 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 384 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 145 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 455 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 455 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 243 bp overlap
RXR 2 datasets
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 66 bp overlap
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 240 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF316DFN 272 bp overlap
SMARCA4 1 dataset
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 264 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 455 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 380 bp overlap
STAG1 1 dataset
ChIP K562 ENCFF674HJF 308 bp overlap
STAT3 2 datasets
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 183 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 432 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 196 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 173 bp overlap
TARDBP 2 datasets
ChIP HepG2 ENCFF132LKJ 271 bp overlap
ChIP HepG2 ENCFF132LKJ 284 bp overlap
TCF7 1 dataset
ChIP WTC11 ENCFF431UYL 264 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 257 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 346 bp overlap
THAP12 1 dataset
ChIP K562 ENCFF453OQF 281 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 170 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 455 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 237 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 272 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 331 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 387 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_DHT GSE123089.ZBTB7A.VCaP_DHT 319 bp overlap
ZNF143 1 dataset
ChIP WTC11 ENCFF249JUK 325 bp overlap
ZNF598 1 dataset
ChIP HepG2 ENCFF356UIO 131 bp overlap
ZNF682 1 dataset
Motif ES_0h ES_0h-ZNF682_MA1599.2 11 bp overlap