chr6 : 97,174,368 – 97,175,053

685 bp 64 TFs 0 linked genes

This 685 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

64 transcription factors

AR 2 datasets

ChIP VCaP GSE148358.AR.VCaP 137 bp overlap

ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 138 bp overlap

ARNT 1 dataset

ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 669 bp overlap

BRD4 1 dataset

ChIP CHL-1 GSE95585.BRD4.CHL-1 432 bp overlap

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

Dmbx1 1 dataset

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

EHF 1 dataset

Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap

ELF2 1 dataset

Motif DE_60h DE_60h-ELF2_MA1483.3 10 bp overlap

ELF4 1 dataset

Motif DE_60h DE_60h-ELF4_MA0641.1 12 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 186 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_60h DE_60h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV6 1 dataset

Motif DE_60h DE_60h-ETV6_MA0645.2 9 bp overlap

ETV7 1 dataset

Motif DE_60h DE_60h-ETV7_MA1708.2 9 bp overlap

EZH2 1 dataset

ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 203 bp overlap

FOSL1::JUND 1 dataset

Motif DE_60h DE_60h-FOSL1JUND_MA1142.2 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 588 bp overlap

ChIP DE DE-FOXA2-2 611 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 176 bp overlap

GATA1 6 datasets

Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap

Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 144 bp overlap

ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 204 bp overlap

GATA1::TAL1 2 datasets

Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA2 7 datasets

ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 273 bp overlap

Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

ChIP K-562 ENCSR000DKA.GATA2.K-562 291 bp overlap

ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 142 bp overlap

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 396 bp overlap

ChIP TF1 GSE73207.GATA2.TF1 583 bp overlap

GATA3 2 datasets

ChIP Jurkat GSE120063.GATA3.Jurkat 293 bp overlap

ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 292 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 194 bp overlap

GATA4 7 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 199 bp overlap

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap

ChIP DE DE-GATA4-1 649 bp overlap

ChIP DE DE-GATA4-2 685 bp overlap

Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 372 bp overlap

GATA5 2 datasets

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 12 datasets

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 173 bp overlap

ChIP DE DE-GATA6-1 612 bp overlap

ChIP DE DE-GATA6-2 631 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 399 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 433 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 451 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 584 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 482 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 498 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 526 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

Gata3 2 datasets

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HAND2 2 datasets

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

Jun 2 datasets

Motif DE_36h DE_36h-Jun_MA0489.3 8 bp overlap

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

MEF2B 1 dataset

Motif DE_60h DE_60h-MEF2B_MA0660.1 12 bp overlap

MEF2D 1 dataset

Motif DE_60h DE_60h-MEF2D_MA0773.1 12 bp overlap

MYOG 1 dataset

ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 181 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap

PAX1 1 dataset

Motif DE_60h DE_60h-PAX1_MA0779.2 16 bp overlap

PAX9 1 dataset

Motif DE_60h DE_60h-PAX9_MA0781.2 16 bp overlap

PBX3 2 datasets

Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap

Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

PKNOX1 2 datasets

Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap

Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap

PRDM1 1 dataset

ChIP HEK293 ENCFF302TBP 421 bp overlap

Ptf1A 1 dataset

Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 370 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 624 bp overlap

SPI1 3 datasets

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 229 bp overlap

ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 253 bp overlap

ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 270 bp overlap

TAL1 1 dataset

ChIP CHRF28811 ERP008568.TAL1.CHRF28811 296 bp overlap

TEAD4 1 dataset

Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap

TFAP4::ETV1 1 dataset

Motif DE_60h DE_60h-TFAP4ETV1_MA1966.2 13 bp overlap

TRPS1 2 datasets

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

ZBTB11 1 dataset

Motif DE_60h DE_60h-ZBTB11_MA2329.1 9 bp overlap

ZBTB32 1 dataset

Motif DE_60h DE_60h-ZBTB32_MA1580.1 10 bp overlap

ZBTB7A 1 dataset

Motif DE_60h DE_60h-ZBTB7A_MA0750.3 9 bp overlap

ZNF140 1 dataset

Motif DE_60h DE_60h-ZNF140_MA1589.2 19 bp overlap

ZNF205 1 dataset

ChIP HEK293T GSE78099.ZNF205.HEK293T 295 bp overlap

ZNF24 2 datasets

Motif DE_36h DE_36h-ZNF24_MA1124.1 13 bp overlap

Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap

ZNF354C 1 dataset

Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap

ZNF440 1 dataset

ChIP HEK293T GSE78099.ZNF440.HEK293T 245 bp overlap

ZNF677 2 datasets

Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap

Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap

ZNF707 1 dataset

Motif DE_60h DE_60h-ZNF707_MA1715.1 15 bp overlap

ZNF768 1 dataset

Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap

ZNF85 1 dataset

Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap

ZSCAN4 1 dataset

Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap