chr6 : 42,257,656 42,257,938
282 bp 52 TFs 0 linked genes
This 282 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:42,252,656 – 42,262,938
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 282 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 282 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 183 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 162 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 274 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 178 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 210 bp overlap
CREB1 2 datasets
ChIP H1 ENCFF955PMP 277 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 109 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 282 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 249 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 219 bp overlap
ELF1 1 dataset
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 256 bp overlap
ETS1 1 dataset
ChIP GM23338 ENCFF701IZH 248 bp overlap
Erg 1 dataset
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
GABPA 1 dataset
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 282 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 260 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 181 bp overlap
Ikzf3 1 dataset
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 234 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 282 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 183 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 207 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 282 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 182 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 89 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MZF1 1 dataset
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 248 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 219 bp overlap
ChIP H1 ENCFF747ZPQ 226 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 282 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 251 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 282 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 282 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 282 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 282 bp overlap
ChIP hESC GSE18292.NANOG.hESC 161 bp overlap
ChIP hESC GSE20650.NANOG.hESC 224 bp overlap
Nfe2l2 1 dataset
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 282 bp overlap
POU5F1 8 datasets
ChIP H1 ENCFF698ZAP 181 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 282 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 282 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 168 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 267 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 265 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 190 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 149 bp overlap
PRDM1 1 dataset
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 282 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 191 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 115 bp overlap
SMAD2 1 dataset
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 194 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 174 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 254 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 282 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 282 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 282 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 77 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 282 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 282 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 282 bp overlap
ChIP WTC11 ENCFF688PEU 282 bp overlap
SP4 2 datasets
ChIP H1 ENCFF473YOB 282 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 149 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 282 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 166 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 265 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 282 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 282 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 165 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 282 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 264 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 282 bp overlap
ZKSCAN8 1 dataset
ChIP WTC11 ENCFF666HNJ 144 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 282 bp overlap
ChIP WTC11 ENCFF893RTM 162 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 270 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 212 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 88 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 98 bp overlap