chr6 : 7,486,916 – 7,487,686

770 bp 53 TFs 1 linked gene

This 770 bp open chromatin element is linked to HNRNPLP1 and is bound by 53 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
HNRNPLP1		4.3 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

53 transcription factors

AR 1 dataset

ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 57 bp overlap

CBX2 1 dataset

ChIP K-562 ENCSR000ATU.CBX2.K-562 307 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 262 bp overlap

FIGLA 1 dataset

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 736 bp overlap

ChIP DE DE-FOXA2-2 716 bp overlap

GATA1 1 dataset

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 258 bp overlap

GATA2 2 datasets

ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 176 bp overlap

ChIP TF1 GSE73207.GATA2.TF1 181 bp overlap

GATA3 1 dataset

ChIP MCF-7 GSE51274.GATA3.MCF-7 257 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 327 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 743 bp overlap

ChIP DE DE-GATA4-2 681 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 709 bp overlap

ChIP DE DE-GATA6-2 697 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 684 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 612 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 708 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 601 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 705 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 731 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 683 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 210 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 396 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 616 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 697 bp overlap

KDM1A 4 datasets

ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 185 bp overlap

ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 382 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 220 bp overlap

ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 209 bp overlap

MED1 1 dataset

ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 234 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 179 bp overlap

MSANTD3 1 dataset

Motif DE_36h DE_36h-MSANTD3_MA1523.2 7 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 494 bp overlap

PBX2 1 dataset

Motif DE_36h DE_36h-PBX2_MA1113.3 9 bp overlap

POU2F1 1 dataset

ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 153 bp overlap

POU4F1 1 dataset

Motif DE_36h DE_36h-POU4F1_MA0790.2 12 bp overlap

POU4F3 1 dataset

Motif DE_36h DE_36h-POU4F3_MA0791.2 12 bp overlap

PPARG 1 dataset

Motif DE_36h DE_36h-PPARG_MA0066.2 19 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 84 bp overlap

Ptf1A 1 dataset

Motif DE_36h DE_36h-Ptf1A_MA1620.2 8 bp overlap

RBM25 1 dataset

ChIP K-562 ENCSR791OZM.RBM25.K-562 207 bp overlap

RCOR1 1 dataset

ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 312 bp overlap

RORB 1 dataset

Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap

RORC 1 dataset

Motif DE_36h DE_36h-RORC_MA1151.2 10 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 662 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 770 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 658 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 630 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 770 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 582 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 580 bp overlap

SNAI2 1 dataset

Motif DE_36h DE_36h-SNAI2_MA0745.3 8 bp overlap

SNAI3 1 dataset

Motif DE_36h DE_36h-SNAI3_MA1559.2 9 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 475 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 668 bp overlap

SREBF1 2 datasets

Motif DE_36h DE_36h-SREBF1_MA0595.1 10 bp overlap

SREBF2 2 datasets

Motif DE_36h DE_36h-SREBF2_MA0596.1 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 218 bp overlap

TBX5 1 dataset

Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap

Yy1 1 dataset

Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap

ZBTB18 1 dataset

Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap

ZEB1 1 dataset

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

ZFX 1 dataset

ChIP MCF-7 GSE102616.ZFX.MCF-7 134 bp overlap

ZKSCAN5 1 dataset

Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap

ZNF257 1 dataset

Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap

ZNF282 1 dataset

Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap

ZNF382 1 dataset

Motif DE_36h DE_36h-ZNF382_MA1594.1 24 bp overlap

ZNF513 1 dataset

ChIP HEK293 ENCFF457TCC 405 bp overlap

ZNF629 2 datasets

ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 276 bp overlap

ChIP HepG2 ENCFF490FFQ 371 bp overlap

ZNF652 1 dataset

Motif DE_36h DE_36h-ZNF652_MA1657.2 9 bp overlap

ZNF784 2 datasets

Motif DE_36h DE_36h-ZNF784_MA1717.2 8 bp overlap

ChIP HepG2 ENCFF265UCH 595 bp overlap

ZSCAN16 1 dataset

Motif DE_36h DE_36h-ZSCAN16_MA2100.1 18 bp overlap