chr5 : 142,398,411 142,398,828
417 bp 46 TFs 1 linked gene
This 417 bp open chromatin element is linked to SPRY4-AS1 and is bound by 46 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SPRY4-AS1 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:142,393,411 – 142,403,828
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 139 bp overlap
BRD4 2 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 291 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 195 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 132 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 215 bp overlap
ESR1 1 dataset
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 119 bp overlap
ETV5 1 dataset
ChIP HepG2 ENCFF456LSA 181 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF207NVJ 170 bp overlap
ChIP HepG2 ENCFF740VZW 142 bp overlap
FOXA2 3 datasets
ChIP HepG2 ENCFF533COJ 143 bp overlap
ChIP HepG2 ENCFF894AYY 220 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 154 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 136 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 291 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 341 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 196 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 305 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 407 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 320 bp overlap
HNF4A 4 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 178 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 93 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 56 bp overlap
ChIP HepG2 ENCFF146SSF 182 bp overlap
HNF4G 2 datasets
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 54 bp overlap
ChIP HepG2 ENCFF323ATZ 129 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 158 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 149 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF017FTI 183 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 59 bp overlap
ChIP HepG2 ENCFF507HCX 320 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 219 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 236 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 180 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 148 bp overlap
ChIP HepG2 ENCFF526NOJ 219 bp overlap
PPARG 2 datasets
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 67 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 194 bp overlap
RAD21 2 datasets
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 165 bp overlap
ChIP HepG2 ENCFF360ZSW 87 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 130 bp overlap
SKI 1 dataset
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 236 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 263 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 417 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 417 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 361 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 381 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 402 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 417 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 376 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 198 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 198 bp overlap
STAT3 1 dataset
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 189 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 76 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 162 bp overlap
TEAD4 1 dataset
ChIP HepG2 ENCFF250NXO 125 bp overlap
TFAP4 1 dataset
ChIP HepG2 ENCFF932XOY 213 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 93 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 305 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 192 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 369 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 406 bp overlap