chr5 : 97,097,521 – 97,097,948
427 bp 50 TFs 1 linked gene
This 427 bp open chromatin element is linked to LIX1-AS1 and is bound by 50 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LIX1-AS1 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:97,092,521 – 97,102,948
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
AR 43 datasets
ChIP 22Rv1_R1881 GSE80742.AR.22Rv1_R1881 95 bp overlap
ChIP 22Rv1_siARFL_R1881 GSE80742.AR.22Rv1_siARFL_R1881 52 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 95 bp overlap
ChIP LNCaP GSE117430.AR.LNCaP 61 bp overlap
ChIP LNCaP GSE64656.AR.LNCaP 156 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 70 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 53 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 68 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 126 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 65 bp overlap
ChIP LNCaP_DHT GSE83860.AR.LNCaP_DHT 58 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 69 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 65 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 58 bp overlap
ChIP LNCaP_HNF4G_ovexp GSE85558.AR.LNCaP_HNF4G_ovexp 68 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 72 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 121 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 70 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 106 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 99 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-Y GSE114732.AR.LNCaP_androgen-Y_hypoxia-Y 61 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 138 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 162 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 200 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 75 bp overlap
ChIP VCaP GSE83650.AR.VCaP 68 bp overlap
ChIP VCaP GSE98809.AR.VCaP 68 bp overlap
ChIP VCaP-LTAD_DHT_10nM GSE94577.AR.VCaP-LTAD_DHT_10nM 109 bp overlap
ChIP VCaP-LTAD_DHT_1nM GSE94577.AR.VCaP-LTAD_DHT_1nM 91 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 61 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 126 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 152 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 204 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 175 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 269 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 85 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 88 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 189 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 101 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 147 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 118 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 74 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 156 bp overlap
ARID1A 1 dataset
ChIP LNCaP_r1881 GSE94682.ARID1A.LNCaP_r1881 69 bp overlap
BACH1 2 datasets
ChIP K-562 ENCSR740NPG.BACH1.K-562 200 bp overlap
ChIP K562 ENCFF419VIM 427 bp overlap
BRD4 3 datasets
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 427 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 316 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 132 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 256 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 128 bp overlap
CEBPB 1 dataset
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 103 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF902MYN 427 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 427 bp overlap
DDX20 2 datasets
ChIP K-562 ENCSR382AIB.DDX20.K-562 265 bp overlap
ChIP K562 ENCFF373BEC 361 bp overlap
ESR1 1 dataset
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 65 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 206 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 73 bp overlap
FOXA1 16 datasets
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 177 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 123 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 65 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 113 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 82 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 54 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 52 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 65 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 89 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 66 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 63 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 53 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 59 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 111 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 88 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 72 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 427 bp overlap
ChIP DE DE-FOXA2-2 427 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 254 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 84 bp overlap
ChIP DE DE-GATA4-1 389 bp overlap
ChIP DE DE-GATA4-2 427 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 184 bp overlap
ChIP foregut GSE117136.GATA4.foregut 370 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 427 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 226 bp overlap
GATA6 6 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 163 bp overlap
ChIP DE DE-GATA6-1 387 bp overlap
ChIP DE DE-GATA6-2 383 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 293 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 269 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 285 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 131 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 211 bp overlap
ChIP K562 ENCFF968WBH 397 bp overlap
HOXB13 6 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 178 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 51 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 128 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 108 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 105 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 119 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 200 bp overlap
KDM1A 1 dataset
ChIP K-562 ENCSR908CMW.KDM1A.K-562 214 bp overlap
KLF6 2 datasets
ChIP K-562 ENCSR297CGF.KLF6.K-562 185 bp overlap
ChIP K562 ENCFF948QSP 291 bp overlap
MITF 4 datasets
ChIP 501-mel GSE137522.MITF.501-mel 215 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 247 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 296 bp overlap
ChIP K562 ENCFF731XJJ 334 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 242 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF568JLK 411 bp overlap
PGR 7 datasets
ChIP T-47D GSE31129.PGR.T-47D 80 bp overlap
ChIP T-47D_E2PG GSE68356.PGR.T-47D_E2PG 56 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 134 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 151 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 75 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 92 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 56 bp overlap
PTRF 1 dataset
ChIP K-562 ENCSR126FZN.PTRF.K-562 244 bp overlap
PTTG1 2 datasets
ChIP K-562 ENCSR314BBS.PTTG1.K-562 295 bp overlap
ChIP K562 ENCFF017KRM 353 bp overlap
RAD21 1 dataset
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 134 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 256 bp overlap
REST 2 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 230 bp overlap
ChIP K562 ENCFF688UKW 197 bp overlap
RUNX1 2 datasets
ChIP NB4 GSE81992.RUNX1.NB4 234 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 105 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 155 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 110 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 173 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 322 bp overlap
SMAD3 1 dataset
ChIP K562 ENCFF885DQE 246 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 427 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 250 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 97 bp overlap
SPI1 2 datasets
ChIP HL-60 ENCFF645GBT 64 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 89 bp overlap
STAT3 1 dataset
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 89 bp overlap
TEAD1 2 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 117 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 109 bp overlap
TEAD4 3 datasets
ChIP H1 ENCFF778PAX 154 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 169 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 83 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 279 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 192 bp overlap
ZNF175 1 dataset
ChIP K-562 ENCSR011PEI.ZNF175.K-562 209 bp overlap
ZNF239 1 dataset
ChIP K562 ENCFF703IKI 331 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 409 bp overlap
ZNF740 2 datasets
ChIP K-562 ENCSR532EMP.ZNF740.K-562 287 bp overlap
ChIP K562 ENCFF447IXE 427 bp overlap
ZNF766 2 datasets
ChIP K562 ENCFF348LDO 167 bp overlap
ChIP K562 ENCFF348LDO 427 bp overlap
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