chr1 : 91,505,152 91,505,475
323 bp 52 TFs 1 linked gene
This 323 bp open chromatin element is linked to CDC7 and is bound by 52 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CDC7 4.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:91,500,152 – 91,510,475
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP Hep-G2 GSE69566.ARID1A.Hep-G2 185 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 56 bp overlap
BRD4 1 dataset
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 323 bp overlap
CCAR2 2 datasets
ChIP Hep-G2 GSE120104.CCAR2.Hep-G2 323 bp overlap
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 95 bp overlap
CEBPA 1 dataset
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 127 bp overlap
CEBPB 4 datasets
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 128 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 162 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 138 bp overlap
ChIP K562 ENCFF189VBN 191 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 129 bp overlap
CTCF 1 dataset
ChIP skin_lower-leg ENCSR252XWG.CTCF.skin_lower-leg 323 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 245 bp overlap
FOSL2 2 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 323 bp overlap
ChIP HepG2 ENCFF796NIA 216 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 293 bp overlap
ChIP DE DE-FOXA2-2 323 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 208 bp overlap
FUS 6 datasets
ChIP Hep-G2 ENCSR590QQP.FUS.Hep-G2 53 bp overlap
ChIP Hep-G2 GSE120104.FUS.Hep-G2 53 bp overlap
ChIP Hep-G2 ENCSR590QQP.FUS.Hep-G2 151 bp overlap
ChIP Hep-G2 GSE120104.FUS.Hep-G2 151 bp overlap
ChIP HepG2 ENCFF167ILJ 277 bp overlap
ChIP HepG2 ENCFF200RNY 286 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 187 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 272 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 323 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 222 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 270 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B GSE145834.HIF1A.BEAS-2B 151 bp overlap
HNRNPK 6 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 94 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 94 bp overlap
ChIP HepG2 ENCFF493GNS 218 bp overlap
ChIP HepG2 ENCFF493GNS 323 bp overlap
ChIP HepG2 ENCFF826MXP 188 bp overlap
ChIP HepG2 ENCFF826MXP 323 bp overlap
HNRNPUL1 7 datasets
ChIP Hep-G2 GSE120104.HNRNPUL1.Hep-G2 323 bp overlap
ChIP Hep-G2 ENCSR183AXJ.HNRNPUL1.Hep-G2 126 bp overlap
ChIP Hep-G2 ENCSR183AXJ.HNRNPUL1.Hep-G2 63 bp overlap
ChIP HepG2 ENCFF066YCU 323 bp overlap
ChIP HepG2 ENCFF066YCU 194 bp overlap
ChIP HepG2 ENCFF150IKP 323 bp overlap
ChIP HepG2 ENCFF150IKP 194 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF238LYK 323 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 259 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 323 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 286 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 233 bp overlap
NANOG 1 dataset
ChIP WA09 GSE105028.NANOG.WA09 212 bp overlap
NONO 8 datasets
ChIP Hep-G2 ENCSR923UTX.NONO.Hep-G2 105 bp overlap
ChIP Hep-G2 GSE120104.NONO.Hep-G2 132 bp overlap
ChIP Hep-G2 GSE120104.NONO.Hep-G2 146 bp overlap
ChIP Hep-G2 ENCSR923UTX.NONO.Hep-G2 89 bp overlap
ChIP HepG2 ENCFF313ACY 238 bp overlap
ChIP HepG2 ENCFF313ACY 270 bp overlap
ChIP HepG2 ENCFF819JPN 238 bp overlap
ChIP HepG2 ENCFF819JPN 270 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 240 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 115 bp overlap
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 100 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 323 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 92 bp overlap
RBM39 2 datasets
ChIP HepG2 ENCFF084YZE 323 bp overlap
ChIP HepG2 ENCFF801JUH 323 bp overlap
SFPQ 1 dataset
ChIP Hep-G2 GSE120104.SFPQ.Hep-G2 323 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 281 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 288 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 162 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 201 bp overlap
SNRNP70 2 datasets
ChIP HepG2 ENCFF311VBW 65 bp overlap
ChIP HepG2 ENCFF375TBI 80 bp overlap
SOX2 2 datasets
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 312 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 323 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 225 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 114 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 194 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 221 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 114 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 132 bp overlap
ZBTB33 2 datasets
ChIP Hep-G2 ENCSR000BNA.ZBTB33.Hep-G2 323 bp overlap
ChIP Hep-G2 ENCSR000BHR.ZBTB33.Hep-G2 177 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 135 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 173 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 251 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 100 bp overlap