chr5 : 63,442,037 – 63,442,980

943 bp 85 TFs 0 linked genes

This 943 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

85 transcription factors

AR 2 datasets

ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 210 bp overlap

ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 108 bp overlap

Arid3a 1 dataset

Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap

Atf3 1 dataset

Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap

BARX1 1 dataset

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BATF 1 dataset

Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap

BATF3 1 dataset

Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif DE_60h DE_60h-BATFJUN_MA0462.3 7 bp overlap

BNC2 1 dataset

Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap

BSX 1 dataset

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

CEBPA 1 dataset

Motif DE_60h DE_60h-CEBPA_MA0102.5 10 bp overlap

CTCF 6 datasets

ChIP CD14-positive monocyte ENCFF087XLR 240 bp overlap

ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 204 bp overlap

ChIP NB69 GSE101295.CTCF.NB69 154 bp overlap

ChIP VCaP ENCSR265ARE.CTCF.VCaP 308 bp overlap

ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 139 bp overlap

ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 138 bp overlap

DLX1 1 dataset

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

EN2 1 dataset

Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 185 bp overlap

ESR1 6 datasets

ChIP MCF-7 GSE117492.ESR1.MCF-7 242 bp overlap

ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 153 bp overlap

ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 210 bp overlap

ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 153 bp overlap

ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 210 bp overlap

ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 255 bp overlap

FEZF2 1 dataset

Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap

FOSL1 1 dataset

Motif DE_60h DE_60h-FOSL1_MA0477.3 9 bp overlap

FOXA1 3 datasets

ChIP ZR751 GSE72249.FOXA1.ZR751 324 bp overlap

ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 219 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 123 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 458 bp overlap

ChIP DE DE-FOXA2-2 495 bp overlap

FOXD3 1 dataset

Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap

GATA2 1 dataset

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA3 6 datasets

ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 325 bp overlap

ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 154 bp overlap

ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 147 bp overlap

ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 328 bp overlap

ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 240 bp overlap

ChIP T47D-A1-2_EtOH GSE112491.GATA3.T47D-A1-2_EtOH 164 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 462 bp overlap

ChIP DE DE-GATA4-2 657 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 436 bp overlap

ChIP DE DE-GATA6-2 640 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 543 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 309 bp overlap

ChIP foregut GSE117136.GATA6.foregut 291 bp overlap

GBX1 1 dataset

Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap

GBX2 1 dataset

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HESX1 1 dataset

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

HOXB13 1 dataset

Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap

Hmx2 1 dataset

Motif DE_60h DE_60h-Hmx2_MA0897.2 15 bp overlap

JUN::JUNB 1 dataset

Motif DE_60h DE_60h-JUNJUNB_MA1132.2 8 bp overlap

JUNB 1 dataset

Motif DE_60h DE_60h-JUNB_MA0490.3 9 bp overlap

Jun 1 dataset

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

LBX1 1 dataset

Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap

LBX2 1 dataset

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

LHX9 1 dataset

Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap

MAFK 1 dataset

Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap

MEIS1 2 datasets

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MSX1 1 dataset

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

Mafg 1 dataset

Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap

Msx3 1 dataset

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 204 bp overlap

NFIB 1 dataset

Motif DE_60h DE_60h-NFIB_MA1643.2 17 bp overlap

NR2C1 1 dataset

Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap

NR3C1 1 dataset

ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 264 bp overlap

NR3C1_mut 1 dataset

ChIP MCF-7_ICI_Dex GSE81510.NR3C1_mut.MCF-7_ICI_Dex 144 bp overlap

Nobox 1 dataset

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

Nr1H2 1 dataset

Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap

PHOX2A 1 dataset

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

POU2F1 1 dataset

Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap

POU3F3 1 dataset

Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap

POU5F1B 1 dataset

Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap

PRRX2 1 dataset

Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap

RAD21 4 datasets

ChIP MCF-7 GSE72082.RAD21.MCF-7 152 bp overlap

ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 116 bp overlap

ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 125 bp overlap

ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 160 bp overlap

RARA::RXRA 1 dataset

Motif DE_60h DE_60h-RARARXRA_MA0159.1 17 bp overlap

RARA::RXRG 1 dataset

Motif DE_60h DE_60h-RARARXRG_MA1149.2 17 bp overlap

RAX 1 dataset

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

SATB1 1 dataset

Motif DE_60h DE_60h-SATB1_MA1963.2 7 bp overlap

SIX2 1 dataset

Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 479 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 301 bp overlap

SOX14 1 dataset

Motif DE_60h DE_60h-SOX14_MA1562.2 9 bp overlap

STAG1 1 dataset

ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 130 bp overlap

Stat2 1 dataset

Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap

TEAD3 1 dataset

Motif DE_60h DE_60h-TEAD3_MA0808.1 8 bp overlap

TFAP2A 1 dataset

ChIP WA09 GSE105081.TFAP2A.WA09 158 bp overlap

THRB 1 dataset

Motif DE_60h DE_60h-THRB_MA1575.2 17 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

ZBTB6 1 dataset

Motif DE_60h DE_60h-ZBTB6_MA1581.2 9 bp overlap

ZNF213 1 dataset

Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap

ZNF528 1 dataset

Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap

ZNF675 1 dataset

Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap

ZNF766 1 dataset

Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap

Zfp809 1 dataset

Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap