chr1 : 90,712,296 90,712,778
482 bp 43 TFs 1 linked gene
This 482 bp open chromatin element is linked to ENSG00000287076 and is bound by 43 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000287076 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:90,707,296 – 90,717,778
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 164 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 482 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 482 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 482 bp overlap
BRD4 5 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 238 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 332 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 482 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 482 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 392 bp overlap
CBX7 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 261 bp overlap
CBX8 2 datasets
ChIP K-562 ENCSR000ATW.CBX8.K-562 97 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 67 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 223 bp overlap
CHD1 1 dataset
ChIP H1 ENCFF998XEK 82 bp overlap
COBLL1 1 dataset
ChIP LTAD_EtOH GSE94577.COBLL1.LTAD_EtOH 292 bp overlap
CTBP2 2 datasets
ChIP WA01 ENCSR000EUO.CTBP2.WA01 125 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 140 bp overlap
CTCF 8 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 217 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 192 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 159 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 154 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 288 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 225 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 99 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 200 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 150 bp overlap
EZH2 17 datasets
ChIP GM23338 ENCFF613YON 174 bp overlap
ChIP GM23338 ENCFF613YON 111 bp overlap
ChIP H1 ENCFF232NZA 482 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 430 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 245 bp overlap
ChIP T98G GSE112240.EZH2.T98G 194 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 366 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 228 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 103 bp overlap
ChIP fibroblast of lung ENCFF479BAW 200 bp overlap
ChIP fibroblast of lung ENCFF479BAW 470 bp overlap
ChIP keratinocyte ENCFF070STK 98 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 166 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 482 bp overlap
ChIP neural cell ENCFF610EPB 390 bp overlap
ChIP neural progenitor cell ENCFF018MKA 482 bp overlap
ChIP neural progenitor cell ENCFF472NFV 482 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 140 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 304 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 307 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 482 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 463 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 482 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 482 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 311 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 413 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 191 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 348 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 249 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 262 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 242 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 482 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 395 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 482 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 356 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 343 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 338 bp overlap
REST 1 dataset
ChIP LNCaP GSE119385.REST.LNCaP 70 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 215 bp overlap
ChIP H1 ENCFF239FFS 482 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 170 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 390 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 368 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 417 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 287 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 203 bp overlap
SRSF3 1 dataset
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 207 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 163 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 71 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 219 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 235 bp overlap
SUZ12 11 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 351 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 197 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 482 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 255 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 260 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 257 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 425 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 146 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 291 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 480 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 115 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 236 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 230 bp overlap