chr5 : 53,554,513 53,554,725
212 bp 42 TFs 1 linked gene
This 212 bp open chromatin element is linked to NDUFS4 and is bound by 42 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NDUFS4 5.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:53,549,513 – 53,559,725
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 212 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 212 bp overlap
ChIP K562 ENCFF938UXQ 212 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 184 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 212 bp overlap
ChIP K562 ENCFF963TXY 176 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 212 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 164 bp overlap
ChIP K562 ENCFF673OEZ 212 bp overlap
CEBPB 3 datasets
ChIP K-562 ENCSR000EHE.CEBPB.K-562 119 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 88 bp overlap
ChIP K562 ENCFF189VBN 176 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 150 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 212 bp overlap
ChIP K562 ENCFF403WPG 212 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 212 bp overlap
ChIP K562 ENCFF739JDE 212 bp overlap
ChIP K562 ENCFF775HUO 212 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 166 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 182 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 212 bp overlap
ChIP DE DE-FOXA2-2 212 bp overlap
GATA1 10 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 151 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 212 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 192 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 140 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 212 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 194 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 178 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 210 bp overlap
ChIP K562 ENCFF094CMK 212 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 212 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 157 bp overlap
ChIP K562 ENCFF544PCK 212 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 212 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 212 bp overlap
ChIP DE DE-GATA4-2 212 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 212 bp overlap
ChIP DE DE-GATA6-2 212 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 212 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 212 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 212 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 212 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 212 bp overlap
ChIP K562 ENCFF928TKZ 212 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 212 bp overlap
ChIP K562 ENCFF744ALD 128 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 201 bp overlap
JUN 1 dataset
ChIP K-562 ENCSR000FAH.JUN.K-562 90 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 183 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 212 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 149 bp overlap
MTA1 2 datasets
ChIP K-562 ENCSR807BGP.MTA1.K-562 212 bp overlap
ChIP K562 ENCFF230ZKA 212 bp overlap
MTA2 3 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 212 bp overlap
ChIP K-562 ENCSR113LAS.MTA2.K-562 208 bp overlap
ChIP K562 ENCFF880VZB 150 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 212 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 212 bp overlap
ChIP K562 ENCFF788MPU 212 bp overlap
ChIP K562 ENCFF866HRM 141 bp overlap
NFYA 1 dataset
ChIP K-562 GSE26439.NFYA.K-562 142 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 212 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 212 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 212 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 212 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 210 bp overlap
ChIP K562 ENCFF506JCB 212 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 212 bp overlap
ChIP K562 ENCFF690CFF 189 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 212 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 212 bp overlap
ChIP K562 ENCFF059YCJ 212 bp overlap
TAL1 17 datasets
ChIP CD34 GSE52924.TAL1.CD34 162 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 152 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 212 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 212 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 212 bp overlap
ChIP K-562_MYO1D-Hub_KO GSE107726.TAL1.K-562_MYO1D-Hub_KO 157 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 160 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 212 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 212 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 185 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 212 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 212 bp overlap
ChIP K562 ENCFF620GMX 212 bp overlap
ChIP K562 ENCFF661CCK 159 bp overlap
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 182 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 212 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 133 bp overlap
TCF12 4 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 212 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 212 bp overlap
ChIP K562 ENCFF909RDY 212 bp overlap
ChIP K562 ENCFF931DJY 205 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 212 bp overlap
ChIP K562 ENCFF319QZT 212 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 212 bp overlap
TRIM24 3 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 212 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 190 bp overlap
ChIP K562 ENCFF616RIL 212 bp overlap
YBX1 1 dataset
ChIP K562 ENCFF051NKX 205 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 212 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 212 bp overlap
ChIP K562 ENCFF795CMH 196 bp overlap
ChIP K562 ENCFF975RXS 212 bp overlap