chr5 : 18,010,172 18,010,374
202 bp 35 TFs 0 linked genes
This 202 bp open chromatin element has no linked target genes and is bound by 35 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:18,005,172 – 18,015,374
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 138 bp overlap
AR 1 dataset
ChIP LAPC-4_R1881 GSE148358.AR.LAPC-4_R1881 130 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 131 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 202 bp overlap
CREB1 6 datasets
ChIP A-549 ENCSR000BRC.CREB1.A-549 105 bp overlap
ChIP MCF-7 ENCFF341ZEM 202 bp overlap
ChIP MCF-7 ENCFF867SAS 202 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 202 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 197 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 165 bp overlap
CTCF 89 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 183 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 163 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 126 bp overlap
ChIP A549 ENCFF034FVO 202 bp overlap
ChIP A549 ENCFF434LUY 132 bp overlap
ChIP A673 ENCFF123WOM 202 bp overlap
ChIP BE2C ENCFF757SRF 202 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 172 bp overlap
ChIP Caco-2 ENCFF753NZV 202 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 155 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 143 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 168 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 171 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 159 bp overlap
ChIP GM12872 ENCFF697BYI 202 bp overlap
ChIP GM12873 ENCFF711LOS 179 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 187 bp overlap
ChIP GM23338 ENCFF531QOI 83 bp overlap
ChIP H1 ENCFF414GZI 184 bp overlap
ChIP H9 ENCFF152GTF 202 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 181 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 163 bp overlap
ChIP HEK293 ENCFF498RMM 202 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 150 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 193 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 202 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 202 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 202 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 202 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 182 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 202 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 202 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 202 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 191 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 134 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 202 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 125 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 157 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 167 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 129 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 107 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 93 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 165 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 202 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 202 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 202 bp overlap
ChIP MCF-7 ENCFF139NQI 202 bp overlap
ChIP MCF-7 ENCFF198DQX 199 bp overlap
ChIP MCF-7 ENCFF494VXA 199 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 159 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 161 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 159 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 202 bp overlap
ChIP PC-3 ENCFF487TUI 202 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 158 bp overlap
ChIP SEM GSE117864.CTCF.SEM 162 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 81 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 202 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 202 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 180 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 132 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 178 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 202 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 163 bp overlap
ChIP endodermal cell ENCFF471YCZ 202 bp overlap
ChIP endothelial cell ENCFF663LIE 202 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 127 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 202 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 69 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 202 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 148 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 137 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 145 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 124 bp overlap
ChIP keratinocyte ENCFF667ULX 202 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 202 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 195 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 142 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 128 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 165 bp overlap
ChIP neural progenitor cell ENCFF420RBO 202 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 174 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 133 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 131 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 202 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 184 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 181 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 149 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 53 bp overlap
ESR1 2 datasets
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 202 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 201 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
HDAC1 1 dataset
ChIP AML GSE131939.HDAC1.AML 202 bp overlap
HIF1A 1 dataset
ChIP macrophage_HYPO GSE43109.HIF1A.macrophage_HYPO 81 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 195 bp overlap
MYC 1 dataset
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 118 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 190 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 127 bp overlap
POU2F1 1 dataset
ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 202 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap
PPARG 2 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 202 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 202 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF967OJF 201 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 121 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 202 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 135 bp overlap
RELA 1 dataset
ChIP KB_IL GSE52469.RELA.KB_IL 80 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 176 bp overlap
SETX 1 dataset
ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 128 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 63 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 133 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 202 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 134 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF143 1 dataset
ChIP HeLa GSE39263.ZNF143.HeLa 179 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap