chr4 : 168,475,779 – 168,476,029

250 bp 50 TFs 1 linked gene

This 250 bp open chromatin element is linked to DDX60L and is bound by 50 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
DDX60L		4.5 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

50 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 207 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 174 bp overlap

ATF3 1 dataset

ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 139 bp overlap

BRD4 1 dataset

ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 250 bp overlap

CBX3 1 dataset

ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 116 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 139 bp overlap

ETV1 1 dataset

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

Erg 1 dataset

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FOSL1 1 dataset

ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 141 bp overlap

FOXA1 3 datasets

ChIP A-549 ENCSR000BPX.FOXA1.A-549 130 bp overlap

ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 66 bp overlap

ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 207 bp overlap

FOXL2 1 dataset

ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 194 bp overlap

GABPA 1 dataset

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

HNRNPK 2 datasets

ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 211 bp overlap

ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 211 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

JUND 2 datasets

ChIP H1 ENCFF468JZD 222 bp overlap

ChIP WA01 ENCSR000BKP.JUND.WA01 104 bp overlap

KLF4 1 dataset

ChIP PDAC GSE64557.KLF4.PDAC 203 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 107 bp overlap

MAZ 5 datasets

ChIP HEK293 ENCFF994GSG 250 bp overlap

ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 225 bp overlap

ChIP HEK293 GSE76494.MAZ.HEK293 188 bp overlap

ChIP K-562 ENCSR000EFX.MAZ.K-562 138 bp overlap

ChIP K-562 ENCSR163IUV.MAZ.K-562 120 bp overlap

MED26 1 dataset

ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 199 bp overlap

NOTCH1 1 dataset

ChIP HPBALL GSE39263.NOTCH1.HPBALL 235 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BJR.NR3C1.A-549 140 bp overlap

PAF1 1 dataset

ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 229 bp overlap

RAD21 2 datasets

ChIP A-549 ENCSR000BUC.RAD21.A-549 200 bp overlap

ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 250 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 182 bp overlap

Rfx6 1 dataset

Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap

SIN3A 1 dataset

ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 162 bp overlap

SMAD3 2 datasets

ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 144 bp overlap

ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 130 bp overlap

SMARCA4 3 datasets

ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 250 bp overlap

ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 181 bp overlap

ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 136 bp overlap

SMC1A 1 dataset

ChIP A-549 GSE76893.SMC1A.A-549 209 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 160 bp overlap

SREBP2 1 dataset

ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 250 bp overlap

STAT3 1 dataset

ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 119 bp overlap

SUPT5H 1 dataset

ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 250 bp overlap

TAL1 1 dataset

ChIP PRIMA2 GSE33850.TAL1.PRIMA2 127 bp overlap

TCF12 2 datasets

ChIP A-549 ENCSR000BQQ.TCF12.A-549 197 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 127 bp overlap

VEZF1 2 datasets

ChIP K-562 ENCSR189YMA.VEZF1.K-562 242 bp overlap

ChIP K562 ENCFF053XDV 170 bp overlap

YY1 1 dataset

ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 113 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF148 2 datasets

ChIP K-562 ENCSR018MSO.ZNF148.K-562 250 bp overlap

ChIP K562 ENCFF352SDL 250 bp overlap

ZNF281 1 dataset

ChIP K562 ENCFF594VNM 166 bp overlap

ZNF319 2 datasets

ChIP K-562 ENCSR231PDA.ZNF319.K-562 250 bp overlap

ChIP K562 ENCFF561ZSB 250 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 250 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 134 bp overlap

ZNF467 1 dataset

ChIP HEK293 GSE76494.ZNF467.HEK293 243 bp overlap

ZNF549 1 dataset

ChIP HEK293 GSE76494.ZNF549.HEK293 189 bp overlap

ZNF596 1 dataset

ChIP HEK293 ENCFF854MGB 247 bp overlap