chr4 : 127,776,701 – 127,776,900
199 bp 52 TFs 1 linked gene
This 199 bp open chromatin element is linked to HSPA4L and is bound by 52 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HSPA4L 5.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:127,771,701 – 127,781,900
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 128 bp overlap
ARID1A 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 199 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 196 bp overlap
ChIP MCF-7_JQ1 GSE123284.ARID1A.MCF-7_JQ1 145 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 199 bp overlap
ChIP K562 ENCFF604FPV 199 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 181 bp overlap
BRD2 1 dataset
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 164 bp overlap
BRD4 6 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 199 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 164 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 56 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 199 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 199 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 170 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 199 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 157 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 199 bp overlap
CREB1 3 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 169 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 179 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 195 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 199 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE41561.ESR1.MCF-7 128 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 191 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 199 bp overlap
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 121 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 130 bp overlap
ChIP MCF-7 ENCFF282FWZ 199 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 199 bp overlap
FOSL2 7 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 199 bp overlap
ChIP A549 ENCFF195CES 199 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 189 bp overlap
ChIP HepG2 ENCFF548CXY 144 bp overlap
ChIP HepG2 ENCFF796NIA 68 bp overlap
ChIP MCF-7 ENCFF716UWP 199 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 194 bp overlap
FOXA1 10 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 199 bp overlap
ChIP HepG2 ENCFF207NVJ 199 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 177 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 181 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 181 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 190 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 97 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 155 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 195 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 165 bp overlap
FOXA2 2 datasets
ChIP HepG2 ENCFF570ABM 199 bp overlap
ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 97 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 143 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 174 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 157 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 199 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 199 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 199 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 199 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 199 bp overlap
ChIP Hep-G2 ENCSR000EEK.JUN.Hep-G2 158 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 125 bp overlap
JUNB 3 datasets
ChIP CD4 GSE116695.JUNB.CD4 199 bp overlap
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 130 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 176 bp overlap
JUND 8 datasets
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 199 bp overlap
ChIP HeLa-S3 ENCFF642OHL 199 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 165 bp overlap
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF172HFZ 199 bp overlap
ChIP HepG2 ENCFF869OPW 199 bp overlap
ChIP SK-N-SH ENCFF971JKN 199 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 188 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 189 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 181 bp overlap
MTA2 3 datasets
ChIP GM12878 ENCFF615CWQ 111 bp overlap
ChIP GM12878 ENCFF615CWQ 199 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 182 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 136 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 102 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 199 bp overlap
NFE2L2 1 dataset
ChIP Hep-G2 ENCSR488EES.NFE2L2.Hep-G2 182 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 124 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 93 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 199 bp overlap
OVOL1 1 dataset
ChIP MCF-7 ENCFF537GWI 189 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 199 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 157 bp overlap
PPARG 4 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 199 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 199 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 199 bp overlap
ChIP HepG2 ENCFF329FBJ 199 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 198 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 115 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 135 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 150 bp overlap
RXRA 1 dataset
ChIP Hep-G2 ENCSR000BHU.RXRA.Hep-G2 128 bp overlap
SKIL 2 datasets
ChIP GM12878 ENCFF171OVM 199 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 199 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 199 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 199 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 199 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 199 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 199 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 143 bp overlap
SMARCA4 8 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 113 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 199 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 84 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 97 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 146 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 142 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 173 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 180 bp overlap
SMARCC1 2 datasets
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 89 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 162 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 199 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 199 bp overlap
TAL1 2 datasets
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 59 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 85 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 199 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 199 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 199 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 199 bp overlap
TFAP2C 3 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 116 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 150 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 157 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 197 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 199 bp overlap
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