chr4 : 115,973,056 – 115,973,252

196 bp 74 TFs 0 linked genes

This 196 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

74 transcription factors

ATF2 2 datasets

Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 196 bp overlap

ATF4 1 dataset

Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap

ATF7 1 dataset

Motif DE_12h DE_12h-ATF7_MA0834.2 10 bp overlap

CDX1 1 dataset

Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap

CDX2 1 dataset

Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap

CDX4 1 dataset

Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap

CEBPG 1 dataset

Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 170 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF798NMV 55 bp overlap

DMRTA2 2 datasets

Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap

Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 196 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 172 bp overlap

ERF::HOXB13 2 datasets

Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap

Motif ES_0h ES_0h-ERFHOXB13_MA1937.2 13 bp overlap

ETV2::DRGX 2 datasets

Motif DE_12h DE_12h-ETV2DRGX_MA1940.2 12 bp overlap

Motif ES_0h ES_0h-ETV2DRGX_MA1940.2 12 bp overlap

FLI1::DRGX 2 datasets

Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap

Motif ES_0h ES_0h-FLI1DRGX_MA1949.2 14 bp overlap

FOS::JUN 1 dataset

Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap

FOSB::JUN 1 dataset

Motif DE_12h DE_12h-FOSBJUN_MA1127.1 11 bp overlap

FOSB::JUNB 1 dataset

Motif DE_12h DE_12h-FOSBJUNB_MA1136.1 10 bp overlap

FOSL1::JUN 1 dataset

Motif DE_12h DE_12h-FOSL1JUN_MA1129.1 10 bp overlap

FOSL2::JUN 1 dataset

Motif DE_12h DE_12h-FOSL2JUN_MA1131.2 10 bp overlap

FOSL2::JUNB 1 dataset

Motif DE_12h DE_12h-FOSL2JUNB_MA1139.2 10 bp overlap

FOSL2::JUND 1 dataset

Motif DE_12h DE_12h-FOSL2JUND_MA1145.2 10 bp overlap

FOXA1 1 dataset

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 123 bp overlap

GATA1::TAL1 1 dataset

Motif ES_0h ES_0h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 1 dataset

Motif ES_0h ES_0h-GATA4_MA0482.3 8 bp overlap

HOXA10 1 dataset

Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap

HOXB13 3 datasets

Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap

Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap

HOXC10 1 dataset

Motif DE_12h DE_12h-HOXC10_MA0905.2 9 bp overlap

HOXC11 1 dataset

Motif DE_12h DE_12h-HOXC11_MA0651.3 11 bp overlap

HOXC12 1 dataset

Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap

HOXD10 1 dataset

Motif DE_12h DE_12h-HOXD10_MA1506.2 10 bp overlap

HOXD9 1 dataset

Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap

Hnf1A 2 datasets

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap

JDP2 1 dataset

Motif DE_12h DE_12h-JDP2_MA0656.2 10 bp overlap

JUN 1 dataset

Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap

JUN::JUNB 1 dataset

Motif DE_12h DE_12h-JUNJUNB_MA1133.2 11 bp overlap

JUND 1 dataset

Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap

LIN54 1 dataset

Motif ES_0h ES_0h-LIN54_MA0619.2 7 bp overlap

MAX 2 datasets

ChIP H1 ENCFF914VQY 172 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 196 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap

MITF 2 datasets

Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap

Motif ES_0h ES_0h-MITF_MA0620.4 10 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 144 bp overlap

MXI1 2 datasets

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 196 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 168 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 168 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 196 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 120 bp overlap

NFIA 2 datasets

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap

NFIX 2 datasets

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap

NFYA 1 dataset

Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap

NFYB 1 dataset

Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap

PKNOX2 2 datasets

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

Motif ES_0h ES_0h-PKNOX2_MA0783.1 12 bp overlap

POU2F1::SOX2 1 dataset

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

SOX18 1 dataset

Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 196 bp overlap

SOX21 1 dataset

Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap

SOX8 1 dataset

Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap

SOX9 1 dataset

Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap

Sox1 1 dataset

Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap

Sox5 1 dataset

Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 196 bp overlap

TAF7 1 dataset

ChIP H1 ENCFF061XZZ 73 bp overlap

TBP 2 datasets

ChIP hESC GSE122298.TBP.hESC 139 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 173 bp overlap

TFE3 2 datasets

Motif DE_12h DE_12h-TFE3_MA0831.3 10 bp overlap

Motif ES_0h ES_0h-TFE3_MA0831.3 10 bp overlap

TFEB 2 datasets

Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap

Motif ES_0h ES_0h-TFEB_MA0692.2 8 bp overlap

TFEC 2 datasets

Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap

Motif ES_0h ES_0h-TFEC_MA0871.3 8 bp overlap

THAP1 2 datasets

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap

TP53 1 dataset

ChIP H9 GSE142050.TP53.H9 196 bp overlap

USF1 5 datasets

Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap

Motif ES_0h ES_0h-USF1_MA0093.4 10 bp overlap

ChIP H1 ENCFF090WVU 195 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 195 bp overlap

ChIP WTC11 ENCFF699QGS 196 bp overlap

USF2 2 datasets

ChIP H1 ENCFF434EDF 196 bp overlap

ChIP WTC11 ENCFF139JAW 196 bp overlap

YY1 3 datasets

ChIP H1 ENCFF524BTL 196 bp overlap

ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 124 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 196 bp overlap

Yy1 1 dataset

Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap

ZIM3 2 datasets

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap

ZNF354A 3 datasets

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap

ZNF768 2 datasets

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap