chr4 : 108,043,588 108,043,869
281 bp 61 TFs 0 linked genes
This 281 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:108,038,588 – 108,048,869
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
ASCL1 2 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 73 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 103 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 281 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 174 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 281 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 56 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 189 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 186 bp overlap
BRD4 8 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 281 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 238 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 281 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 281 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 281 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 145 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 281 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 240 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 188 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 169 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 281 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 217 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 281 bp overlap
CTCF 15 datasets
ChIP 22Rv1 ENCFF466OXN 63 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 281 bp overlap
ChIP NPC GSE115407.CTCF.NPC 192 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 97 bp overlap
ChIP SEM GSE117864.CTCF.SEM 125 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 128 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 195 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 281 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 249 bp overlap
ChIP endodermal cell ENCFF471YCZ 258 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 162 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 281 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 153 bp overlap
ChIP neural cell ENCFF335ADI 249 bp overlap
ChIP neural progenitor cell ENCFF581WPG 281 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 273 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF335XTP 281 bp overlap
ChIP BLaER1 ENCFF364PUR 281 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 216 bp overlap
EP300 1 dataset
ChIP neural cell ENCFF442QNK 68 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 281 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 156 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 225 bp overlap
EZH2 3 datasets
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 281 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 96 bp overlap
ChIP neural progenitor cell ENCFF018MKA 281 bp overlap
FANCL 1 dataset
ChIP Jurkat GSE45864.FANCL.Jurkat 102 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 144 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 192 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 202 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 171 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 129 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 200 bp overlap
KMT2A 1 dataset
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 265 bp overlap
MAF 2 datasets
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 278 bp overlap
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 281 bp overlap
MAFK 1 dataset
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 222 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 281 bp overlap
MYC 3 datasets
ChIP BL41 GSE30726.MYC.BL41 133 bp overlap
ChIP NCI-H2171 GSE41105.MYC.NCI-H2171 253 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 124 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 248 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 281 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 281 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 281 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 188 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 281 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 171 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
RAD21 1 dataset
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 135 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 220 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 281 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 281 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 239 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 281 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 226 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 178 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 234 bp overlap
SMARCA4 4 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 228 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 220 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 112 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 121 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 253 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 92 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 281 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 180 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 161 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 281 bp overlap
SUPT5H 1 dataset
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 195 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 113 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 281 bp overlap
TCF4 1 dataset
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 184 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 256 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 256 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 160 bp overlap
ZNF143 1 dataset
ChIP HeLa GSE39263.ZNF143.HeLa 162 bp overlap