chr4 : 77,012,534 77,013,096
562 bp 56 TFs 3 linked genes
This 562 bp open chromatin element is linked to SEPTIN11, CCNI, and CCNG2 and is bound by 56 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
SEPTIN11 63.0 kb Distal Multiome
CCNI 63.2 kb Distal Multiome
CCNG2 144.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:77,007,534 – 77,018,096
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 260 bp overlap
ChIP prostate GSE56288.AR.prostate 360 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 312 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 356 bp overlap
Ar 1 dataset
Motif DE_36h DE_36h-Ar_MA0007.4 16 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 223 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 422 bp overlap
CTCF 3 datasets
ChIP heart left ventricle ENCFF987PUT 371 bp overlap
ChIP testis ENCFF409BGH 291 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 191 bp overlap
DMRTA1 3 datasets
Motif DE_48h DE_48h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_60h DE_60h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_72h DE_72h-DMRTA1_MA1707.2 10 bp overlap
Dux 3 datasets
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 271 bp overlap
ERG 3 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 119 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 157 bp overlap
ChIP VCaP_SH2_DHT GSE79128.ERG.VCaP_SH2_DHT 186 bp overlap
ESR2 1 dataset
Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 183 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 151 bp overlap
ETV1 1 dataset
ChIP GIST GSE22441.ETV1.GIST 136 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 303 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 499 bp overlap
ChIP DE DE-FOXA2-2 434 bp overlap
FOXC1 3 datasets
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
Motif DE_72h DE_72h-FOXC1_MA0032.2 11 bp overlap
FOXC2 3 datasets
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
Motif DE_72h DE_72h-FOXC2_MA0846.2 11 bp overlap
FOXE1 3 datasets
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXN3 3 datasets
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
Motif DE_72h DE_72h-FOXN3_MA1489.1 8 bp overlap
Foxl2 3 datasets
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
Motif DE_72h DE_72h-Foxl2_MA1607.2 10 bp overlap
Foxq1 3 datasets
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
Motif DE_72h DE_72h-Foxq1_MA0040.2 10 bp overlap
GATA1::TAL1 3 datasets
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 9 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 173 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 194 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 242 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 218 bp overlap
ChIP SK-N-SH ENCFF764OZD 321 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 147 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 135 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 435 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 289 bp overlap
GATA3 4 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 326 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 190 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 205 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 310 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 529 bp overlap
ChIP DE DE-GATA4-2 562 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 276 bp overlap
ChIP foregut GSE117136.GATA4.foregut 365 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 312 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 218 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 359 bp overlap
ChIP DE DE-GATA6-2 562 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 378 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 372 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 402 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 470 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 562 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 421 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 439 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 373 bp overlap
Gata3 4 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HAND2 2 datasets
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
KLF6 3 datasets
Motif DE_48h DE_48h-KLF6_MA1517.2 9 bp overlap
Motif DE_60h DE_60h-KLF6_MA1517.2 9 bp overlap
Motif DE_72h DE_72h-KLF6_MA1517.2 9 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 304 bp overlap
ChIP RH4 GSE83726.MED1.RH4 365 bp overlap
MYB 2 datasets
ChIP DU528 GSE94000.MYB.DU528 350 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 282 bp overlap
MYCN 1 dataset
ChIP SH-EP_MYCNER_minOHT GSE111905.MYCN.SH-EP_MYCNER_minOHT 131 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 205 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 438 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 250 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 247 bp overlap
NR3C1 1 dataset
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 106 bp overlap
PGR 1 dataset
ChIP HUVEC-C_PR_PROGESTERON GSE43786.PGR.HUVEC-C_PR_PROGESTERON 233 bp overlap
POU2F3 1 dataset
Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap
POU5F1 1 dataset
Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap
PRDM9 1 dataset
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
Pgr 1 dataset
Motif DE_36h DE_36h-Pgr_MA2323.1 17 bp overlap
RELA 1 dataset
ChIP KB_IL GSE52469.RELA.KB_IL 111 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE76181.RUNX1.Jurkat 178 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 372 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 562 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 278 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 228 bp overlap
SREBF1 2 datasets
Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0829.3 10 bp overlap
Stat5b 1 dataset
Motif DE_60h DE_60h-Stat5b_MA1625.2 9 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 339 bp overlap
TFAP4 2 datasets
Motif DE_48h DE_48h-TFAP4_MA1570.1 10 bp overlap
Motif DE_60h DE_60h-TFAP4_MA1570.1 10 bp overlap
TRPS1 4 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 293 bp overlap
ZNF574 1 dataset
Motif DE_72h DE_72h-ZNF574_MA1982.2 14 bp overlap
ZNF677 1 dataset
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap