chr1 : 75,132,114 75,132,725
611 bp 52 TFs 2 linked genes
This 611 bp open chromatin element is linked to LHX8-AS1 and LHX8 and is bound by 52 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
LHX8-AS1 at TSS At TSS Proximity
LHX8 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:75,127,114 – 75,137,725
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 334 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BCOR 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 196 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 562 bp overlap
BMI1 1 dataset
ChIP K-562 ENCSR782WRO.BMI1.K-562 100 bp overlap
BRD4 2 datasets
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 423 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 256 bp overlap
CBX2 2 datasets
ChIP HepG2 ENCFF838BNI 284 bp overlap
ChIP K562 ENCFF578AQI 144 bp overlap
CREB3 1 dataset
Motif DE_12h DE_12h-CREB3_MA0638.2 12 bp overlap
CTCF 1 dataset
ChIP cardiac muscle cell ENCFF777TNC 83 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 263 bp overlap
ChIP BLaER1 ENCFF335XTP 81 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 284 bp overlap
ESR2 1 dataset
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
EZH2 23 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 611 bp overlap
ChIP GM23248 ENCFF404ZHM 287 bp overlap
ChIP GM23338 ENCFF613YON 611 bp overlap
ChIP H1 ENCFF232NZA 611 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 437 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 547 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 611 bp overlap
ChIP K-562 ENCSR000AQE.EZH2.K-562 77 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 212 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 129 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 327 bp overlap
ChIP astrocyte ENCFF365JTP 291 bp overlap
ChIP astrocyte ENCFF365JTP 84 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 62 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 498 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 85 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 511 bp overlap
ChIP hepatocyte ENCFF118DKH 184 bp overlap
ChIP hepatocyte ENCFF552DZB 611 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 73 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 611 bp overlap
ChIP neural progenitor cell ENCFF472NFV 611 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 300 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 606 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 611 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-HUSH-KO GSE95451.MORC2.HeLa_V5-HUSH-KO 251 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 581 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 245 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 73 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 611 bp overlap
ChIP K562 ENCFF022XJR 50 bp overlap
ChIP K562 ENCFF653BQJ 87 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SS18 3 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 581 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 278 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 139 bp overlap
SUZ12 9 datasets
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 611 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 186 bp overlap
ChIP K562 ENCFF397TBJ 312 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 494 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 545 bp overlap
ChIP NT2/D1 ENCFF574SXS 426 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 611 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 190 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 161 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 611 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 262 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZBTB14 1 dataset
Motif DE_12h DE_12h-ZBTB14_MA1650.2 8 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF669 1 dataset
Motif DE_12h DE_12h-ZNF669_MA1985.1 15 bp overlap
ZNF76 1 dataset
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap