chr3 : 79,769,319 – 79,769,529

210 bp 50 TFs 0 linked genes

This 210 bp open chromatin element has no linked target genes and is bound by 50 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

50 transcription factors

ATF4 1 dataset

Motif ES_0h ES_0h-ATF4_MA0833.3 10 bp overlap

CEBPG 1 dataset

Motif ES_0h ES_0h-CEBPG_MA1636.2 10 bp overlap

Ddit3::Cebpa 1 dataset

Motif ES_0h ES_0h-Ddit3Cebpa_MA0019.2 10 bp overlap

EOMES 3 datasets

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

Motif ES_0h ES_0h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 192 bp overlap

EP300 3 datasets

ChIP WA01 ENCSR000BKK.EP300.WA01 187 bp overlap

ChIP neural ENCSR843ZUP.EP300.neural 210 bp overlap

ChIP neural cell ENCFF442QNK 210 bp overlap

ERG 1 dataset

ChIP Jurkat GSE49091.ERG.Jurkat 202 bp overlap

ESR1 1 dataset

ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 112 bp overlap

ETV2::DRGX 1 dataset

Motif ES_0h ES_0h-ETV2DRGX_MA1940.2 12 bp overlap

ETV5::DRGX 1 dataset

Motif ES_0h ES_0h-ETV5DRGX_MA1944.2 12 bp overlap

ETV7 1 dataset

Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

GATA4 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 132 bp overlap

HAND2 1 dataset

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 159 bp overlap

HNRNPK 2 datasets

ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 123 bp overlap

ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 118 bp overlap

Hand1 1 dataset

Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap

Hand1::Tcf3 1 dataset

Motif DE_12h DE_12h-Hand1Tcf3_MA0092.2 9 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 2 datasets

Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap

Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 210 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 183 bp overlap

NFYA 2 datasets

Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap

Motif ES_0h ES_0h-NFYA_MA0060.4 8 bp overlap

NFYC 2 datasets

Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap

Motif ES_0h ES_0h-NFYC_MA1644.2 7 bp overlap

NR5A1 2 datasets

Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap

Motif ES_0h ES_0h-NR5A1_MA1540.3 12 bp overlap

NR6A1 2 datasets

Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap

Motif ES_0h ES_0h-NR6A1_MA1541.2 14 bp overlap

OSR2 2 datasets

Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap

Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 210 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 210 bp overlap

RAD21 2 datasets

ChIP neural ENCSR198ZYJ.RAD21.neural 210 bp overlap

ChIP neural cell ENCFF564MOT 210 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 184 bp overlap

RNF2 1 dataset

ChIP WA09 GSE105028.RNF2.WA09 169 bp overlap

Rhox11 1 dataset

Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap

SMAD1 1 dataset

ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap

SMAD2 1 dataset

Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap

SMC3 3 datasets

ChIP neural ENCSR404BPV.SMC3.neural 210 bp overlap

ChIP neural cell ENCFF795YGY 210 bp overlap

ChIP neural cell ENCFF795YGY 124 bp overlap

SOX21 2 datasets

Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap

Motif ES_0h ES_0h-SOX21_MA0866.1 15 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 210 bp overlap

TBR1 2 datasets

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

Motif ES_0h ES_0h-TBR1_MA0802.2 9 bp overlap

TBX2 2 datasets

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

Motif ES_0h ES_0h-TBX2_MA0688.2 9 bp overlap

TBX3 2 datasets

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 76 bp overlap

Thap11 2 datasets

Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap

Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 132 bp overlap

ZNF148 1 dataset

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

ZNF281 1 dataset

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ZNF282 1 dataset

Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap

ZNF317 2 datasets

Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap

Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap

ZNF530 1 dataset

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

ZNF549 1 dataset

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

ZNF652 6 datasets

Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap

Motif ES_0h ES_0h-ZNF652_MA1657.2 9 bp overlap

ZNF85 1 dataset

Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap