chr3 : 57,196,993 57,197,243
250 bp 43 TFs 1 linked gene
This 250 bp open chromatin element is linked to HESX1 and is bound by 43 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HESX1 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:57,191,993 – 57,202,243
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 250 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 135 bp overlap
ATF1 2 datasets
ChIP K562 ENCFF817JQF 250 bp overlap
ChIP K562 ENCFF817JQF 247 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 250 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 147 bp overlap
BRD2 5 datasets
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 141 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 63 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 122 bp overlap
ChIP MDA-MB-231_NTsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_NTsiRNA_JQ1 112 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 160 bp overlap
BRD4 1 dataset
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 250 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 249 bp overlap
ChIP H1 ENCFF998XEK 221 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 103 bp overlap
CREM 1 dataset
ChIP K562 ENCFF180STA 250 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 250 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 179 bp overlap
E2F1 4 datasets
ChIP K-562 ENCSR720HUL.E2F1.K-562 250 bp overlap
ChIP K562 ENCFF191BFW 250 bp overlap
ChIP K562 ENCFF191BFW 193 bp overlap
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 73 bp overlap
EP400 2 datasets
ChIP K562 ENCFF850OZQ 250 bp overlap
ChIP K562 ENCFF850OZQ 201 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 250 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 179 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF015GDS 250 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 250 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCFF781IAU 224 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF753XDO 219 bp overlap
ChIP GM12878 ENCFF824TGK 250 bp overlap
ChIP K562 ENCFF348IBL 250 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF238LYK 250 bp overlap
ChIP GM12878 ENCFF918AID 236 bp overlap
KMT2A 1 dataset
ChIP SEM GSE83671.KMT2A.SEM 132 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCFF064TDQ 221 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 86 bp overlap
ChIP K562 ENCFF731XJJ 216 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 250 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 250 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 250 bp overlap
ChIP GM12878 ENCFF615CWQ 152 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 250 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 61 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCFF273VKX 250 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 244 bp overlap
POLR2A 8 datasets
ChIP HeLa-S3 ENCFF224LWS 250 bp overlap
ChIP HeLa-S3 ENCFF224LWS 250 bp overlap
ChIP K562 ENCFF215CWW 250 bp overlap
ChIP K562 ENCFF262YXJ 250 bp overlap
ChIP K562 ENCFF836GHX 250 bp overlap
ChIP K562 ENCFF836GHX 185 bp overlap
ChIP spleen ENCFF044PYR 250 bp overlap
ChIP spleen ENCFF446ZGT 250 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 250 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 213 bp overlap
RB1 1 dataset
ChIP GM12878 ENCFF495RZI 250 bp overlap
RBFOX2 4 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 117 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 117 bp overlap
ChIP K562 ENCFF196WTG 250 bp overlap
ChIP K562 ENCFF967GRF 250 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 114 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 65 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 250 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 244 bp overlap
SUPT5H 3 datasets
ChIP HeLa GSE125534.SUPT5H.HeLa 66 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 70 bp overlap
ChIP K562 ENCFF902PAW 154 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 250 bp overlap
ChIP HeLa-S3 ENCFF556LCN 250 bp overlap
ZBTB12 1 dataset
ChIP K562 ENCFF933CVM 176 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 132 bp overlap
ChIP K562 ENCFF352SDL 250 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 220 bp overlap
ZNF384 5 datasets
ChIP GM12878 ENCFF229VSP 95 bp overlap
ChIP HEK293T ENCFF019DZX 146 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 55 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 62 bp overlap
ChIP K562 ENCFF365NXQ 115 bp overlap
ZNF441 1 dataset
ChIP HepG2 ENCFF738UDK 250 bp overlap