chr3 : 32,998,701 32,999,462
761 bp 41 TFs 4 linked genes
This 761 bp open chromatin element is linked to 4 target genes and is bound by 41 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
GLB1 98.1 kb Distal Multiome
CRTAP 115.0 kb Distal Multiome
TRIM71 181.1 kb Distal Multiome
FBXL2 278.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:32,993,701 – 33,004,462
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
BATF3 1 dataset
ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 378 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 150 bp overlap
BRD4 3 datasets
ChIP KK-1_JQ1 GSE94732.BRD4.KK-1_JQ1 256 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 141 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 315 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 291 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 293 bp overlap
ChIP BLaER1 ENCFF460KDD 91 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 314 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 233 bp overlap
ChIP hESC GSE26097.EOMES.hESC 327 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 101 bp overlap
ETV6 3 datasets
ChIP GM12878 ENCFF105ZMI 421 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 210 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 354 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 578 bp overlap
ChIP DE DE-FOXA2-2 585 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 517 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 303 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 149 bp overlap
GATA3 1 dataset
ChIP CD4_TH2 GSE72266.GATA3.CD4_TH2 383 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 761 bp overlap
ChIP DE DE-GATA4-2 761 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 761 bp overlap
ChIP DE DE-GATA6-2 761 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 628 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 271 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 687 bp overlap
IRF4 2 datasets
ChIP BC-3 GSE132777.IRF4.BC-3 486 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 419 bp overlap
JUN 2 datasets
ChIP 786-O GSE86092.JUN.786-O 183 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 761 bp overlap
JUNB 3 datasets
ChIP GM12878 ENCFF667EJQ 240 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 461 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 441 bp overlap
MAF 1 dataset
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 659 bp overlap
MYB 2 datasets
ChIP CD4_TH2 GSE72266.MYB.CD4_TH2 498 bp overlap
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 415 bp overlap
NFIC 3 datasets
ChIP GM12878 ENCFF259FWL 248 bp overlap
ChIP GM12878 ENCFF259FWL 406 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 375 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 350 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 460 bp overlap
RELB 1 dataset
ChIP L1236 GSE63736.RELB.L1236 117 bp overlap
RUNX2 1 dataset
ChIP PER-117 GSE151819.RUNX2.PER-117 286 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 187 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 155 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 110 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 761 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 411 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 713 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 624 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 212 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 761 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 761 bp overlap
STAT3 3 datasets
ChIP Th1_IL-6_C7 GSE130810.STAT3.Th1_IL-6_C7 189 bp overlap
ChIP Th1_IL-6_HyIL6 GSE130810.STAT3.Th1_IL-6_HyIL6 199 bp overlap
ChIP Th1_IL-6_Mut3 GSE130810.STAT3.Th1_IL-6_Mut3 162 bp overlap
STAT5B 4 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 384 bp overlap
ChIP CD8_H9RET GSE64713.STAT5B.CD8_H9RET 311 bp overlap
ChIP CD8_H9RETR GSE64713.STAT5B.CD8_H9RETR 268 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 323 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 235 bp overlap
TBX21 2 datasets
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 184 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 393 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 156 bp overlap