chr2 : 201,148,432 201,148,970
538 bp 63 TFs 2 linked genes
This 538 bp open chromatin element is linked to CFLAR and IMPDH1P10 and is bound by 63 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
CFLAR at TSS At TSS Proximity
IMPDH1P10 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:201,143,432 – 201,153,970
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AR 4 datasets
ChIP VCaP GSE148358.AR.VCaP 277 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 86 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 205 bp overlap
ChIP prostate_P7_T GSE130408.AR.prostate_P7_T 201 bp overlap
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 216 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 295 bp overlap
ATF1 1 dataset
ChIP HepG2 ENCFF239LTQ 404 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 217 bp overlap
BRD4 13 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 223 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 538 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 329 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 122 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 180 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 108 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 77 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 73 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 108 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 282 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 266 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 527 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 122 bp overlap
CDX2 3 datasets
ChIP LS180 GSE31939.CDX2.LS180 275 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 251 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 244 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 122 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 196 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 163 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 220 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 141 bp overlap
FOXA1 14 datasets
ChIP LNCaP GSE56288.FOXA1.LNCaP 303 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 155 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 158 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 452 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 91 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 163 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 180 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 224 bp overlap
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 202 bp overlap
ChIP prostate_2484 GSE130408.FOXA1.prostate_2484 189 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 219 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 164 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 147 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 233 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 255 bp overlap
ChIP DE DE-FOXA2-1 449 bp overlap
ChIP DE DE-FOXA2-2 538 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 516 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 126 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 354 bp overlap
ChIP DE DE-GATA4-1 465 bp overlap
ChIP DE DE-GATA4-2 538 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 478 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 538 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 448 bp overlap
ChIP DE DE-GATA6-2 538 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 438 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 538 bp overlap
HMGB2 1 dataset
ChIP IMR-90_proliferating GSE98245.HMGB2.IMR-90_proliferating 415 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 59 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 52 bp overlap
HOXB13 22 datasets
ChIP A-549 ENCSR967ZMR.HOXB13.A-549 169 bp overlap
ChIP LNCaP GSE56288.HOXB13.LNCaP 178 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 86 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 299 bp overlap
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 154 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 253 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 221 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 302 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 318 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 200 bp overlap
ChIP prostate_P1 GSE130408.HOXB13.prostate_P1 162 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 241 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 248 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 209 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 231 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 304 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 389 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 196 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 333 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 239 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 177 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 280 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 126 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 246 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 298 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 259 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 184 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 75 bp overlap
MAX 1 dataset
ChIP liver ENCFF584QGB 164 bp overlap
MBD4 1 dataset
ChIP HepG2 ENCFF785HSD 113 bp overlap
MED1 5 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 410 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 189 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 465 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 50 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 83 bp overlap
MLLT1 1 dataset
ChIP MCF-7 ENCSR427BBI.MLLT1.MCF-7 125 bp overlap
NCOR1 1 dataset
ChIP HepG2 ENCFF685NAH 51 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 201 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 202 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 304 bp overlap
NKX2-1 1 dataset
ChIP NCI-H2087 GSE39998.NKX2-1.NCI-H2087 159 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 161 bp overlap
NR2F2 1 dataset
ChIP HepG2 ENCFF483TVJ 65 bp overlap
NR3C1 1 dataset
ChIP NALM-6 GSE67046.NR3C1.NALM-6 75 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 341 bp overlap
PAX5 2 datasets
ChIP NALM-6 GSE126300.PAX5.NALM-6 125 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 132 bp overlap
PBX1 1 dataset
ChIP A549 ENCFF475JCE 56 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 274 bp overlap
POLR2A 4 datasets
ChIP prostate gland ENCFF881OMH 165 bp overlap
ChIP transverse colon ENCFF193UMS 434 bp overlap
ChIP transverse colon ENCFF607LKE 185 bp overlap
ChIP transverse colon ENCFF610RWV 180 bp overlap
POLR2G 4 datasets
ChIP HepG2 ENCFF241AEG 437 bp overlap
ChIP HepG2 ENCFF241AEG 232 bp overlap
ChIP HepG2 ENCFF508UTS 427 bp overlap
ChIP HepG2 ENCFF508UTS 225 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 143 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 165 bp overlap
PRDM1 3 datasets
ChIP A549 ENCFF012KDW 257 bp overlap
ChIP A549 ENCFF012KDW 88 bp overlap
ChIP HEK293 ENCFF302TBP 421 bp overlap
RAD21 1 dataset
ChIP MDM_-dNS1 GSE103477.RAD21.MDM_-dNS1 442 bp overlap
RARB 1 dataset
ChIP SK-N-SH ENCFF475WOR 154 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 114 bp overlap
RELA 4 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 206 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 106 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 235 bp overlap
ChIP mammary-epithelial-cell_IL1 GSE71069.RELA.mammary-epithelial-cell_IL1 51 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 508 bp overlap
SMAD3 1 dataset
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 136 bp overlap
SMARCA2 1 dataset
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 245 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 300 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 232 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 63 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 151 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 55 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 243 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 279 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 489 bp overlap
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 78 bp overlap
SNAI2 2 datasets
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 447 bp overlap
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 318 bp overlap
SUPT6H 2 datasets
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 355 bp overlap
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 356 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 193 bp overlap
THAP7 1 dataset
ChIP HepG2 ENCFF034KPY 449 bp overlap
TP63 2 datasets
ChIP A549 ENCFF399JYQ 317 bp overlap
ChIP A549 ENCFF399JYQ 171 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH ENCFF981MBE 441 bp overlap
ZNF624 1 dataset
ChIP A549 ENCFF802OXN 140 bp overlap