chr1 : 47,686,675 47,687,113
438 bp 51 TFs 0 linked genes
This 438 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:47,681,675 – 47,692,113
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 75 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 438 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 160 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 248 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 203 bp overlap
CTCF 1 dataset
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 126 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 296 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 287 bp overlap
EZH2 3 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 290 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 269 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 56 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 254 bp overlap
ChIP DE DE-GATA4-2 333 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 235 bp overlap
ChIP foregut GSE117136.GATA4.foregut 374 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 204 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 344 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-2 376 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 314 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 361 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 438 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 420 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 374 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 438 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 306 bp overlap
ChIP foregut GSE117136.GATA6.foregut 217 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 170 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 438 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 252 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 183 bp overlap
HDGF 1 dataset
ChIP HEK293T ENCFF357ANX 377 bp overlap
HMBOX1 2 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 148 bp overlap
ChIP K562 ENCFF317JJX 135 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 289 bp overlap
IRF2 1 dataset
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 272 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 205 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 438 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 237 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 238 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 267 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 150 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 274 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 151 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 4 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 337 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 309 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 326 bp overlap
SMARCA4 4 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 68 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 331 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 330 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 203 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 258 bp overlap
SUPT5H 1 dataset
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 184 bp overlap
Six4 1 dataset
Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 122 bp overlap
TRIM28 6 datasets
ChIP HEK293 ENCFF582MWI 438 bp overlap
ChIP HEK293 ENCFF582MWI 281 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 239 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 301 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 237 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 215 bp overlap
YY1 3 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 291 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 152 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 152 bp overlap
ZBTB20 3 datasets
ChIP HEK293 ENCFF524ADK 394 bp overlap
ChIP HEK293 ENCFF524ADK 401 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 438 bp overlap
ZBTB6 2 datasets
ChIP HEK293 ENCFF881ECZ 309 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 248 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 325 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 137 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 349 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 359 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 438 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 438 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 346 bp overlap
ZNF449 1 dataset
ChIP HEK293 GSE76494.ZNF449.HEK293 123 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 50 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 358 bp overlap
ZNF780A 1 dataset
ChIP HEK293T GSE78099.ZNF780A.HEK293T 332 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 163 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 438 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 336 bp overlap