chr2 : 181,679,567 – 181,680,020
453 bp 62 TFs 3 linked genes
This 453 bp open chromatin element is linked to CERKL, NEUROD1, and ENSG00000234595 and is bound by 62 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CERKL 644 bp At TSS Proximity
NEUROD1 806 bp At TSS Proximity
ENSG00000234595 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:181,674,567 – 181,685,020
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 199 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 435 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 329 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 292 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 279 bp overlap
BRD4 6 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 445 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 225 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 175 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 268 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 281 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 278 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 276 bp overlap
CEBPB 2 datasets
ChIP K562 ENCFF584CTB 67 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 242 bp overlap
Cebpa 9 datasets
ChIP BLaER1 ENCFF093OYK 309 bp overlap
ChIP BLaER1 ENCFF140EYR 232 bp overlap
ChIP BLaER1 ENCFF262VBH 261 bp overlap
ChIP BLaER1 ENCFF274GAT 289 bp overlap
ChIP BLaER1 ENCFF335XTP 61 bp overlap
ChIP BLaER1 ENCFF346MCV 126 bp overlap
ChIP BLaER1 ENCFF364PUR 253 bp overlap
ChIP BLaER1 ENCFF460KDD 132 bp overlap
ChIP BLaER1 ENCFF896HSY 72 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
EZH2 24 datasets
ChIP A673 ENCFF955JRZ 322 bp overlap
ChIP GM23338 ENCFF613YON 290 bp overlap
ChIP H1 ENCFF232NZA 453 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 161 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 164 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 134 bp overlap
ChIP T-REx-293_K27WT_12h GSE118954.EZH2.T-REx-293_K27WT_12h 119 bp overlap
ChIP T-REx-293_K27WT_24h GSE118954.EZH2.T-REx-293_K27WT_24h 120 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 453 bp overlap
ChIP T-REx-293_K27WT_72h GSE118954.EZH2.T-REx-293_K27WT_72h 319 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 418 bp overlap
ChIP astrocyte ENCFF365JTP 381 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 111 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 161 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 453 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 453 bp overlap
ChIP hepatocyte ENCFF552DZB 374 bp overlap
ChIP keratinocyte ENCFF070STK 297 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 413 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 360 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 453 bp overlap
ChIP neural progenitor cell ENCFF472NFV 453 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 294 bp overlap
EZH2_phosphoT487 2 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 97 bp overlap
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 187 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GATA6 1 dataset
ChIP DE_D1 S14-DE-d1-GATA6-exp1 58 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 99 bp overlap
JARID2 6 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 199 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 453 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 325 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 453 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 453 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 268 bp overlap
Lhx3 1 dataset
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 195 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 230 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 106 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 56 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 311 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 273 bp overlap
NEUROD1 2 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 326 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 348 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
PBX2 1 dataset
Motif DE_12h DE_12h-PBX2_MA1113.3 9 bp overlap
PCGF2 2 datasets
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 305 bp overlap
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 453 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 195 bp overlap
POU5F1 1 dataset
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 176 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 216 bp overlap
RARA::RXRA 1 dataset
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
RARA::RXRG 1 dataset
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
REST 4 datasets
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 148 bp overlap
ChIP PFSK-1 ENCFF845VHA 273 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 252 bp overlap
ChIP liver ENCSR893QWP.REST.liver 94 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 409 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 304 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 68 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 104 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 179 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 453 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 180 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 56 bp overlap
SMARCA4 1 dataset
ChIP NSC GSE125033.SMARCA4.NSC 221 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 65 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 230 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 153 bp overlap
SUZ12 5 datasets
ChIP H1 ENCFF881NFR 453 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 445 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 148 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 345 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 229 bp overlap
Six4 1 dataset
Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 378 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 264 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 230 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 192 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 250 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
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