chr2 : 161,245,319 – 161,245,670
351 bp 47 TFs 1 linked gene
This 351 bp open chromatin element is linked to LINC01806 and is bound by 47 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01806 581 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:161,240,319 – 161,250,670
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP HepG2 ENCFF207QHL 212 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 207 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 111 bp overlap
BRD2 10 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 160 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 107 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 207 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 180 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 288 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 288 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 206 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 206 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 267 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 137 bp overlap
BRD4 18 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 97 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 351 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 351 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 159 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 88 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 108 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 351 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 128 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 133 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 133 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 351 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 351 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 351 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 156 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 191 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 110 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 351 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 143 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 128 bp overlap
EP300 1 dataset
ChIP MCF-7 GSE128445.EP300.MCF-7 99 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_6 GSE104399.ESR1.breast_tumor_Male_6 163 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 282 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 81 bp overlap
EZH2 1 dataset
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 351 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 351 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 85 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 132 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 132 bp overlap
HNRNPLL 1 dataset
ChIP HepG2 ENCFF952XAB 234 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 83 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 85 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 126 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 117 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 101 bp overlap
MED1 1 dataset
ChIP HCT-116 GSE121798.MED1.HCT-116 222 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 59 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 351 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 82 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 120 bp overlap
ONECUT1 4 datasets
ChIP H9 ERP004206.ONECUT1.H9 309 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 94 bp overlap
ChIP liver ERP002306.ONECUT1.liver 105 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 326 bp overlap
PCBP2 1 dataset
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 115 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 92 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 193 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 351 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 347 bp overlap
POLR2A 1 dataset
ChIP GM12878 ENCFF412KAE 129 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 153 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 351 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 307 bp overlap
SIN3A 2 datasets
ChIP GM12878 ENCFF238GUI 64 bp overlap
ChIP GM12878 ENCFF238GUI 274 bp overlap
SMAD5 1 dataset
ChIP GM12878 ENCFF178LKN 279 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 329 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 208 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 150 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 59 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 253 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 121 bp overlap
SUPT5H 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 109 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 95 bp overlap
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 97 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 68 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 201 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 66 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 238 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 217 bp overlap
ZBTB40 5 datasets
ChIP GM12878 ENCFF346DYM 163 bp overlap
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 156 bp overlap
ChIP Hep-G2 ENCSR525YFS.ZBTB40.Hep-G2 100 bp overlap
ChIP MCF-7 ENCFF044DWL 105 bp overlap
ChIP MCF-7 ENCSR318LVG.ZBTB40.MCF-7 168 bp overlap
ZFX 7 datasets
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 121 bp overlap
ChIP HCT-116 GSE102616.ZFX.HCT-116 121 bp overlap
ChIP HCT116 ENCFF324IZY 158 bp overlap
ChIP HEK293T ENCFF402JZW 57 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 51 bp overlap
ChIP PrEC GSE102616.ZFX.PrEC 188 bp overlap
ChIP PrEC GSE102616.ZFX.PrEC 95 bp overlap
ZNF18 1 dataset
ChIP HepG2 ENCFF479ZIQ 110 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 244 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 146 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 87 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 90 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 351 bp overlap
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