chr2 : 153,595,988 – 153,596,275
287 bp 37 TFs 1 linked gene
This 287 bp open chromatin element is linked to ENSG00000227400 and is bound by 37 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000227400 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:153,590,988 – 153,601,275
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP GSE110655.AR.LNCaP 223 bp overlap
ChIP LNCaP_F266S_shFOXA1_Ethanol GSE128883.AR.LNCaP_F266S_shFOXA1_Ethanol 166 bp overlap
ChIP prostate GSE65478.AR.prostate 184 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 205 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 244 bp overlap
BRD2 5 datasets
ChIP SUM159PT_DMSO GSE131097.BRD2.SUM159PT_DMSO 78 bp overlap
ChIP SUM159PT_JQ1 GSE116879.BRD2.SUM159PT_JQ1 152 bp overlap
ChIP SUM159PT_JQ1_MGSK2801 GSE116879.BRD2.SUM159PT_JQ1_MGSK2801 97 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 193 bp overlap
ChIP SUM159PT_R_JQ1 GSE131097.BRD2.SUM159PT_R_JQ1 287 bp overlap
BRD4 11 datasets
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 209 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 197 bp overlap
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 266 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 287 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 227 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 287 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 236 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 287 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 287 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 287 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 287 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 176 bp overlap
CBX3 2 datasets
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 144 bp overlap
ChIP HCT116 ENCFF947BOL 287 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 140 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 212 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 264 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 219 bp overlap
EGR1 1 dataset
ChIP macrophage_D3 GSE136216.EGR1.macrophage_D3 211 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 72 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 98 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 161 bp overlap
ESR1 3 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 160 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 217 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 195 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 220 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 148 bp overlap
FOXA1 2 datasets
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 108 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 108 bp overlap
HOXB13 11 datasets
ChIP 22Rv1 GSE96652.HOXB13.22Rv1 191 bp overlap
ChIP LNCaP GSE56288.HOXB13.LNCaP 271 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 81 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 188 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 283 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 287 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 222 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 204 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 165 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 257 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 282 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCFF064TDQ 287 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 163 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 248 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 188 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 275 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 202 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 287 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 276 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 213 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 141 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 141 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 202 bp overlap
SMARCA4 7 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 287 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 264 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 287 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 136 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 287 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 287 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 287 bp overlap
SPI1 4 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 99 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 76 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 205 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 64 bp overlap
SRF 4 datasets
ChIP HCT-116 ENCSR000BSC.SRF.HCT-116 155 bp overlap
ChIP HCT116 ENCFF497JOF 287 bp overlap
ChIP Ishikawa ENCFF992QXM 130 bp overlap
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 212 bp overlap
STAT3 2 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 161 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 189 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 100 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 153 bp overlap
TCF7L2 2 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 256 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 231 bp overlap
YY1 8 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 248 bp overlap
ChIP HCT116 ENCFF497ZQZ 199 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 218 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 283 bp overlap
ChIP Ishikawa ENCFF505XQX 247 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 253 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 199 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 204 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 200 bp overlap
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