chr2 : 65,331,150 65,331,849
699 bp 47 TFs 6 linked genes
This 699 bp open chromatin element is linked to 6 target genes and is bound by 47 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
SPRED2 101.1 kb Distal Multiome
ACTR2 103.7 kb Distal Multiome
LINC02934 105.2 kb Distal Multiome
RAB1A 201.4 kb Distal Multiome
CEP68 275.1 kb Distal Multiome
LINC02245 275.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:65,326,150 – 65,336,849
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 191 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 318 bp overlap
ERG 3 datasets
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 213 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 156 bp overlap
ChIP aortic-endothelial-cell_D46 GSE139377.ERG.aortic-endothelial-cell_D46 192 bp overlap
FLI1 1 dataset
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 208 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 699 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 494 bp overlap
ChIP DE DE-FOXA2-2 445 bp overlap
FOXL2 1 dataset
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 139 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 207 bp overlap
GATA2 1 dataset
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 171 bp overlap
GATA3 1 dataset
ChIP BE2C GSE65664.GATA3.BE2C 166 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 470 bp overlap
ChIP DE DE-GATA4-2 675 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 261 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 398 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 524 bp overlap
ChIP DE DE-GATA6-2 699 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 448 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 553 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 448 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 559 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 542 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 511 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 432 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 377 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 314 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 271 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 453 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 129 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 157 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 337 bp overlap
MYCN 4 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 396 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 184 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 263 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 113 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 324 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 466 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 248 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 285 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 245 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 346 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 65 bp overlap
NR3C1 8 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 229 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 169 bp overlap
ChIP HCC1937 GSE152203.NR3C1.HCC1937 357 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 141 bp overlap
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 127 bp overlap
ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 262 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 420 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 233 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 179 bp overlap
PGR 5 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 317 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 348 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 308 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 286 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 340 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 440 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 257 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 203 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 248 bp overlap
ChIP HepG2 ENCFF561IAJ 232 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 479 bp overlap
RELA 27 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 195 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 184 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 175 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 204 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 334 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 361 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 383 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 225 bp overlap
ChIP aortic-endothelial-cell_IL1B_D24 GSE139377.RELA.aortic-endothelial-cell_IL1B_D24 160 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 234 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 203 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 224 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 272 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 189 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 265 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 234 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 288 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 361 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 317 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 347 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 269 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 293 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 218 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 230 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 242 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 258 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 298 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 120 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 372 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 245 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 446 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 175 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 181 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 183 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 60 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 113 bp overlap
TP63 1 dataset
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 225 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 266 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 331 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 348 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 171 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 303 bp overlap