chr2 : 47,516,287 – 47,517,101

814 bp 72 TFs 0 linked genes

This 814 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

72 transcription factors

BCL6 1 dataset

Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 625 bp overlap

CTCF 1 dataset

ChIP erythroid GSE67783.CTCF.erythroid 204 bp overlap

CTCFL 1 dataset

Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

EOMES 4 datasets

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap

Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 227 bp overlap

ESR1 2 datasets

ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 272 bp overlap

ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 228 bp overlap

EWSR1-FLI1 2 datasets

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 272 bp overlap

ChIP DE DE-FOXA2-2 299 bp overlap

FOXC2 1 dataset

Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

Foxl2 1 dataset

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

GATA6 5 datasets

ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 385 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 498 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 353 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 282 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 196 bp overlap

GLIS3 2 datasets

ChIP H9_plus GSE109562.GLIS3.H9_plus 329 bp overlap

ChIP H9_plus GSE109562.GLIS3.H9_plus 396 bp overlap

HOXB9 1 dataset

Motif DE_12h DE_12h-HOXB9_MA1503.2 9 bp overlap

HOXC10 1 dataset

Motif DE_12h DE_12h-HOXC10_MA0905.2 9 bp overlap

HOXC9 1 dataset

Motif DE_12h DE_12h-HOXC9_MA0485.3 9 bp overlap

HOXD11 1 dataset

Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap

Hoxa11 1 dataset

Motif DE_12h DE_12h-Hoxa11_MA0911.2 9 bp overlap

JUN 3 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 477 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 383 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 438 bp overlap

LIN54 1 dataset

Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap

MAZ 1 dataset

Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap

MGA 3 datasets

Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap

Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap

Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap

MYOD1 1 dataset

ChIP RH4 GSE83726.MYOD1.RH4 144 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 811 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 429 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 768 bp overlap

RBPJ 2 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap

SMAD2 1 dataset

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 276 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 418 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 581 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 467 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 275 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 556 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 512 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 527 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 521 bp overlap

SMAD3 2 datasets

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 345 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 728 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 245 bp overlap

SMARCC1 3 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 411 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 538 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 192 bp overlap

SOX14 1 dataset

Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 730 bp overlap

SOX18 1 dataset

Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 326 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 179 bp overlap

SOX8 1 dataset

Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap

SRY 1 dataset

Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap

Stat5a 1 dataset

Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap

Stat5a::Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 390 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 301 bp overlap

TBR1 3 datasets

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap

Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap

TBX1 3 datasets

Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap

Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap

Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap

TBX15 3 datasets

Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap

Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap

Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap

TBX18 3 datasets

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap

Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap

TBX2 3 datasets

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap

Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap

TBX20 3 datasets

Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap

Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap

Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap

TBX21 3 datasets

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap

Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap

TBX3 3 datasets

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap

Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap

TBX4 3 datasets

Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap

Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap

Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap

TBX5 3 datasets

Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap

Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap

Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap

TEAD1 2 datasets

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 174 bp overlap

TEAD3 1 dataset

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

TEAD4 1 dataset

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 673 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 584 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

Tbx6 3 datasets

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

ZIM3 1 dataset

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

ZNF140 1 dataset

Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap

ZNF257 2 datasets

Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap

Motif DE_24h DE_24h-ZNF257_MA1710.2 10 bp overlap

ZNF320 2 datasets

Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap

Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap

ZNF354A 1 dataset

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

ZNF574 1 dataset

Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap

ZNF692 2 datasets

Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap

Motif DE_24h DE_24h-ZNF692_MA1986.2 8 bp overlap

ZNF75A 1 dataset

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

ZNF766 1 dataset

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap