chrX : 36,985,388 36,986,237
849 bp 53 TFs 2 linked genes
This 849 bp open chromatin element is linked to ENSG00000290955 and ENSG00000231069 and is bound by 53 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000290955 at TSS At TSS Proximity
ENSG00000231069 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:36,980,388 – 36,991,237
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
53 transcription factors
Source
Cell type
BCL6 1 dataset
Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 251 bp overlap
BRD2 6 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 100 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 95 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 138 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 126 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 108 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 163 bp overlap
BRD4 2 datasets
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 98 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 180 bp overlap
CTCF 131 datasets
ChIP 22Rv1 ENCFF466OXN 298 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 119 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 223 bp overlap
ChIP A549 ENCFF034FVO 282 bp overlap
ChIP A549 ENCFF182TCQ 215 bp overlap
ChIP A673 ENCFF123WOM 195 bp overlap
ChIP AG09309 ENCFF478XPS 244 bp overlap
ChIP Calu3 ENCFF526MDS 316 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
ChIP GM23338 ENCFF772DML 158 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 211 bp overlap
ChIP H1 ENCFF764RHO 240 bp overlap
ChIP H9 ENCFF152GTF 261 bp overlap
ChIP HEK293 ENCFF498RMM 234 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 162 bp overlap
ChIP HFF-Myc ENCFF680WYR 331 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 194 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 83 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 65 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 128 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF111MGE 205 bp overlap
ChIP K562 ENCFF598YSU 269 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 219 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 225 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 187 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 95 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 134 bp overlap
ChIP PC-3 ENCFF487TUI 309 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 204 bp overlap
ChIP Panc1 ENCFF056JQX 296 bp overlap
ChIP RWPE2 ENCFF911IEE 292 bp overlap
ChIP SK-N-SH ENCFF575DMG 345 bp overlap
ChIP THP-1_PMA_Dex-0h GSE103477.CTCF.THP-1_PMA_Dex-0h 163 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.CTCF.THP-1_PMA_Dex-6h 176 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 145 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 165 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 161 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 154 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 180 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 188 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 149 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 175 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 177 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 106 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 179 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 209 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 207 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 141 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 181 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 200 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 155 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 185 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 207 bp overlap
ChIP VCaP ENCFF858YQT 336 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 134 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 131 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 178 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 201 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 164 bp overlap
ChIP ascending aorta ENCFF138DXQ 310 bp overlap
ChIP ascending aorta ENCFF451CCT 184 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 172 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 251 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 238 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 157 bp overlap
ChIP body of pancreas ENCFF269EDN 288 bp overlap
ChIP body of pancreas ENCFF438KTE 342 bp overlap
ChIP body of pancreas ENCFF798MEO 98 bp overlap
ChIP body of pancreas ENCFF881RGF 106 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 213 bp overlap
ChIP brain ENCFF685VRG 400 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 254 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 154 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 294 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 357 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 180 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 253 bp overlap
ChIP endodermal cell ENCFF471YCZ 249 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 231 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 164 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 167 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 421 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 236 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 202 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 161 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 234 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 222 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 180 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 161 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 250 bp overlap
ChIP hepatocyte ENCFF263BLJ 171 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 156 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 107 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 189 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 126 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 128 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 137 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 156 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 151 bp overlap
ChIP islet ERP004003.CTCF.islet 163 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 126 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 283 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 140 bp overlap
ChIP myotube ENCFF981UHL 289 bp overlap
ChIP neural crest cell ENCFF182LWK 228 bp overlap
ChIP neural progenitor cell ENCFF420RBO 255 bp overlap
ChIP neural progenitor cell ENCFF581WPG 397 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 182 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 134 bp overlap
ChIP osteoblast ENCFF491ZJZ 287 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 185 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 241 bp overlap
ChIP prostate gland ENCFF655GBO 269 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 237 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 264 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 235 bp overlap
ChIP right lobe of liver ENCFF011NDG 316 bp overlap
ChIP right lobe of liver ENCFF250KSY 312 bp overlap
ChIP right lobe of liver ENCFF956UTA 317 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 245 bp overlap
ChIP smooth muscle cell ENCFF656FBT 290 bp overlap
ChIP spleen ENCFF954DQD 364 bp overlap
ChIP stomach ENCFF918GTC 381 bp overlap
ChIP thyroid gland ENCFF300RYK 321 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 368 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 190 bp overlap
ChIP upper lobe of left lung ENCFF374MAK 347 bp overlap
ChIP upper lobe of left lung ENCFF654BFF 336 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 198 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 251 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 297 bp overlap
ChIP H1 ENCFF785DWK 95 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
ELF1 2 datasets
ChIP K-562 ENCSR000BMD.ELF1.K-562 127 bp overlap
ChIP K562 ENCFF496AKI 202 bp overlap
ELK4 2 datasets
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
Motif DE_36h DE_36h-ELK4_MA0076.3 9 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 198 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 167 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 4 datasets
ChIP hepatocyte ENCFF552DZB 323 bp overlap
ChIP neural progenitor cell ENCFF018MKA 820 bp overlap
ChIP neural progenitor cell ENCFF472NFV 471 bp overlap
ChIP neural progenitor cell ENCFF472NFV 337 bp overlap
FOXE1 2 datasets
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Motif DE_36h DE_36h-FOXE1_MA1487.3 12 bp overlap
HMGXB4 2 datasets
ChIP WTC11 ENCFF962POR 621 bp overlap
ChIP WTC11 ENCFF962POR 445 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 194 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 254 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 360 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 161 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 123 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP Ishikawa ENCFF064TDQ 312 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 232 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 232 bp overlap
PCGF1 2 datasets
ChIP WA01 GSE104690.PCGF1.WA01 143 bp overlap
ChIP WA01 GSE104690.PCGF1.WA01 376 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF706IUS 163 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 245 bp overlap
Prdm15 2 datasets
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
Motif DE_36h DE_36h-Prdm15_MA1616.2 11 bp overlap
Prdm5 2 datasets
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap
RAD21 22 datasets
ChIP H1 ENCFF698EWO 114 bp overlap
ChIP H1 ENCFF967OJF 212 bp overlap
ChIP Ishikawa ENCFF570JVV 213 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 131 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 142 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 148 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 139 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 141 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 164 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 105 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 187 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 188 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 137 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 145 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 147 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 168 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 170 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 154 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 160 bp overlap
ChIP liver ENCFF485PAC 329 bp overlap
ChIP liver ENCFF522JHE 131 bp overlap
REST 2 datasets
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 138 bp overlap
SP5 4 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 297 bp overlap
ZBTB11 2 datasets
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
Motif DE_36h DE_36h-ZBTB11_MA2329.1 9 bp overlap
ZBTB6 2 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_36h DE_36h-ZBTB6_MA1581.2 9 bp overlap
ZBTB7A 2 datasets
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
Motif DE_36h DE_36h-ZBTB7A_MA0750.3 9 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
ZNF549 2 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif DE_36h DE_36h-ZNF770_MA2099.1 8 bp overlap
ZSCAN16 2 datasets
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_36h DE_36h-ZSCAN16_MA2100.1 18 bp overlap