chrX : 11,566,315 – 11,566,466
151 bp 58 TFs 0 linked genes
This 151 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:11,561,315 – 11,571,466
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 151 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 151 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BIP.BCL11A.WA01 105 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 151 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 151 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 151 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 131 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 151 bp overlap
CTCF 4 datasets
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 104 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 146 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 151 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 151 bp overlap
DMRTC2 1 dataset
Motif ES_0h ES_0h-DMRTC2_MA1479.2 11 bp overlap
DUX4 1 dataset
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
EBF1 1 dataset
Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap
EGR1 1 dataset
ChIP WA01 ENCSR000BJA.EGR1.WA01 98 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 108 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 151 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 149 bp overlap
Ebf4 1 dataset
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FOXH1 2 datasets
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
Motif ES_0h ES_0h-FOXH1_MA0479.2 8 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 146 bp overlap
Hand1 1 dataset
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
JARID2 1 dataset
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 151 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 151 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 142 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 151 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 151 bp overlap
MAFF 1 dataset
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 151 bp overlap
MZF1 1 dataset
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
Mafb 1 dataset
Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 151 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 151 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 151 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 151 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 136 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 151 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 151 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 151 bp overlap
ChIP hESC GSE18292.NANOG.hESC 151 bp overlap
ChIP hESC GSE20650.NANOG.hESC 151 bp overlap
NIPBL 4 datasets
ChIP WA09 GSE105028.NIPBL.WA09 151 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 146 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 151 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 143 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 151 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 151 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 151 bp overlap
ChIP H1 ENCFF833NJP 142 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 2 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F2 2 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F4 2 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 15 datasets
ChIP BG03 GSE21614.POU5F1.BG03 151 bp overlap
ChIP GM23338 ENCFF333SNB 151 bp overlap
ChIP H1 ENCFF698ZAP 151 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 151 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 151 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 151 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 128 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 151 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 151 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 151 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 151 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 151 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 151 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 151 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 151 bp overlap
POU5F1B 2 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
PRDM14 3 datasets
ChIP hESC GSE22767.PRDM14.hESC 151 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 131 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 151 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 151 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 151 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 151 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 151 bp overlap
RNF2 3 datasets
ChIP WA01 GSE104690.RNF2.WA01 151 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 151 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 151 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 151 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 151 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 151 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 151 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 151 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 151 bp overlap
SMAD3 4 datasets
ChIP BG03 GSE21614.SMAD3.BG03 146 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 151 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 151 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 147 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 151 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 151 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 151 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 119 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 136 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 112 bp overlap
SOX2 7 datasets
ChIP H9 GSE46837.SOX2.H9 151 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 151 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 149 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 151 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 151 bp overlap
ChIP hESC GSE18292.SOX2.hESC 58 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 151 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 148 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 151 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 151 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 151 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 143 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 151 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 145 bp overlap
ZNF24 1 dataset
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF684 1 dataset
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF85 1 dataset
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
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