chr19 : 46,710,667 46,710,982
315 bp 56 TFs 1 linked gene
This 315 bp open chromatin element is linked to PRKD2 and is bound by 56 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PRKD2 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:46,705,667 – 46,715,982
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AR 2 datasets
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 71 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 246 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 82 bp overlap
BRD4 1 dataset
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 186 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 223 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 109 bp overlap
CTCF 1 dataset
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 156 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 102 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 134 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 212 bp overlap
ESR1 1 dataset
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 203 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 271 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 52 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 315 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 298 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 214 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 191 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 171 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 111 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 144 bp overlap
KLF1 4 datasets
ChIP HEK293 ENCFF159QSW 202 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 315 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 177 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 65 bp overlap
KLF14 1 dataset
ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 201 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 76 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 248 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 213 bp overlap
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 51 bp overlap
KLF9 2 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 109 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 263 bp overlap
MITF 1 dataset
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 142 bp overlap
MYCN 2 datasets
ChIP BE2C GSE80151.MYCN.BE2C 179 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 179 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 312 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 175 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 269 bp overlap
POLR2A 7 datasets
ChIP GM23338 ENCFF450WCS 265 bp overlap
ChIP H1 ENCFF566JSR 315 bp overlap
ChIP H1 ENCFF566JSR 115 bp overlap
ChIP K562 ENCFF262YXJ 261 bp overlap
ChIP spleen ENCFF044PYR 57 bp overlap
ChIP spleen ENCFF446ZGT 153 bp overlap
ChIP spleen ENCFF706IUS 315 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 280 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 303 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 195 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 79 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 79 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 315 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 315 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 315 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 244 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 300 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 217 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap
SP1 2 datasets
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 151 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 194 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 315 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 315 bp overlap
SP4 2 datasets
ChIP HEK293 GSE76494.SP4.HEK293 315 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 298 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 315 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 304 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 235 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 263 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 119 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 121 bp overlap
TBP 5 datasets
ChIP H1 ENCFF859IIO 189 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 126 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 276 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 88 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 206 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 250 bp overlap
TP63 2 datasets
ChIP keratinocyte GSE33571.TP63.keratinocyte 152 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 204 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 130 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 315 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 232 bp overlap
ChIP K562 ENCFF427SDV 269 bp overlap
ChIP K562 ENCFF875HLX 118 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 304 bp overlap
ZNF263 1 dataset
ChIP HEK293T GSE78099.ZNF263.HEK293T 162 bp overlap
ZNF445 1 dataset
ChIP HEK293T GSE78099.ZNF445.HEK293T 65 bp overlap
ZNF543 1 dataset
ChIP HepG2 ENCFF864SAR 121 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 277 bp overlap