chr18 : 59,786,218 59,786,769
551 bp 92 TFs 0 linked genes
This 551 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:59,781,218 – 59,791,769
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
ATF6 1 dataset
Motif DE_24h DE_24h-ATF6_MA1466.2 13 bp overlap
Alx1 1 dataset
Motif DE_24h DE_24h-Alx1_MA0854.2 8 bp overlap
Alx4 1 dataset
Motif DE_24h DE_24h-Alx4_MA0853.2 12 bp overlap
Arid3a 1 dataset
Motif DE_24h DE_24h-Arid3a_MA0151.1 6 bp overlap
Arx 1 dataset
Motif DE_24h DE_24h-Arx_MA0874.2 10 bp overlap
BARX1 1 dataset
Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap
BCL6 1 dataset
Motif DE_24h DE_24h-BCL6_MA0463.3 13 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD2.MV4-11_IBET151_50nM 184 bp overlap
BSX 1 dataset
Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap
CUX1 1 dataset
Motif DE_24h DE_24h-CUX1_MA0754.3 9 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 198 bp overlap
DLX1 1 dataset
Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 439 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 297 bp overlap
FIGLA 1 dataset
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 534 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 489 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 510 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 430 bp overlap
FOXA2 2 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 260 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 417 bp overlap
FOXB1 1 dataset
Motif DE_24h DE_24h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_24h DE_24h-FOXC1_MA0032.2 11 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 352 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 255 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 397 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-2 361 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 422 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 500 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 551 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 458 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 533 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 551 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 404 bp overlap
GBX2 1 dataset
Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 551 bp overlap
HOXA7 1 dataset
Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap
HOXB13 1 dataset
Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 419 bp overlap
Hmga1 1 dataset
Motif DE_24h DE_24h-Hmga1_MA2124.1 8 bp overlap
Hmx1 1 dataset
Motif DE_24h DE_24h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif DE_24h DE_24h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif DE_24h DE_24h-Hmx3_MA0898.2 9 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 341 bp overlap
Irf1 2 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap
JUN 6 datasets
ChIP Calu-3 GSE85401.JUN.Calu-3 138 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 534 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 313 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 505 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 551 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 551 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 398 bp overlap
JUND 1 dataset
Motif DE_24h DE_24h-JUND_MA0492.2 11 bp overlap
LBX2 1 dataset
Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 92 bp overlap
MEIS1 1 dataset
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MSX1 1 dataset
Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 535 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 369 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 262 bp overlap
NR3C1 3 datasets
ChIP A-549 ENCSR000BHG.NR3C1.A-549 86 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 82 bp overlap
ChIP MCF-10A_EGF_DEX_20min GSE102355.NR3C1.MCF-10A_EGF_DEX_20min 150 bp overlap
Nfe2l2 1 dataset
Motif DE_24h DE_24h-Nfe2l2_MA0150.3 11 bp overlap
Nobox 1 dataset
Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap
POU1F1 1 dataset
Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_24h DE_24h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_24h DE_24h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_24h DE_24h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_24h DE_24h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_24h DE_24h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_24h DE_24h-POU3F4_MA0789.1 9 bp overlap
POU5F1 2 datasets
Motif DE_24h DE_24h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 523 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 305 bp overlap
Pax7 1 dataset
Motif DE_24h DE_24h-Pax7_MA0680.3 10 bp overlap
Plagl1 1 dataset
Motif DE_24h DE_24h-Plagl1_MA1615.2 8 bp overlap
RAX 1 dataset
Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 331 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 381 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 273 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 188 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 294 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 367 bp overlap
SREBF1 2 datasets
Motif DE_24h DE_24h-SREBF1_MA0595.1 10 bp overlap
Motif DE_24h DE_24h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_24h DE_24h-SREBF2_MA0596.1 10 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap
Motif DE_24h DE_24h-TFAP2A_MA0872.1 13 bp overlap
VENTX 1 dataset
Motif DE_24h DE_24h-VENTX_MA0724.1 9 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 204 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 111 bp overlap
ZEB1 1 dataset
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ZIM3 1 dataset
ChIP HEK293 GSE76494.ZIM3.HEK293 137 bp overlap
ZNF320 2 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
ZNF354A 1 dataset
Motif DE_24h DE_24h-ZNF354A_MA1978.2 20 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 83 bp overlap