chr18 : 51,447,351 – 51,447,740
389 bp 53 TFs 0 linked genes
This 389 bp open chromatin element has no linked target genes and is bound by 53 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:51,442,351 – 51,452,740
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
53 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 182 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 93 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 155 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 268 bp overlap
BRD4 10 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 217 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 389 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 379 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 389 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 298 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 389 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 389 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 389 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 233 bp overlap
ChIP hESC GSE33281.BRD4.hESC 121 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 152 bp overlap
CDK9 4 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 188 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 374 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 389 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 389 bp overlap
CDX2 2 datasets
ChIP LS180_125 GSE31939.CDX2.LS180_125 125 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 150 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 140 bp overlap
CTCF 2 datasets
ChIP MM1-S GSE43743.CTCF.MM1-S 327 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 239 bp overlap
CTNNB1 1 dataset
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 122 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 251 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 51 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 236 bp overlap
ESR1 51 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 259 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 179 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 374 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 361 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 351 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 262 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 389 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 273 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 302 bp overlap
ChIP MCF-7_E2 GSE115607.ESR1.MCF-7_E2 291 bp overlap
ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 344 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 214 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 200 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 164 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 291 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 260 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 268 bp overlap
ChIP MCF-7_E2_90min GSE109820.ESR1.MCF-7_E2_90min 230 bp overlap
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 122 bp overlap
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 138 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 111 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 112 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 252 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 200 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 176 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 264 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 237 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 185 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 103 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 373 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 389 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 202 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 330 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 264 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 389 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 389 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 389 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 389 bp overlap
ChIP VCaP_E2_ERA GSE43985.ESR1.VCaP_E2_ERA 269 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 379 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 365 bp overlap
ChIP breast_tumor_Female_2 GSE104399.ESR1.breast_tumor_Female_2 389 bp overlap
ChIP breast_tumor_Male_12 GSE104399.ESR1.breast_tumor_Male_12 389 bp overlap
ChIP breast_tumor_Male_15 GSE104399.ESR1.breast_tumor_Male_15 224 bp overlap
ChIP breast_tumor_Male_18 GSE104399.ESR1.breast_tumor_Male_18 151 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 182 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 290 bp overlap
ChIP breast_tumor_Male_29 GSE104399.ESR1.breast_tumor_Male_29 182 bp overlap
ChIP breast_tumor_Male_5 GSE104399.ESR1.breast_tumor_Male_5 389 bp overlap
ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 324 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 389 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 389 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 389 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 310 bp overlap
ESR1_Y537S 2 datasets
ChIP T-47D_dox GSE94493.ESR1_Y537S.T-47D_dox 278 bp overlap
ChIP T-47D_dox_E2 GSE94493.ESR1_Y537S.T-47D_dox_E2 233 bp overlap
EZH2 1 dataset
ChIP A-1847 GSE95643.EZH2.A-1847 159 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 275 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 389 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 138 bp overlap
IRF4 1 dataset
ChIP U266 GSE142493.IRF4.U266 389 bp overlap
JUN 3 datasets
ChIP HUES-8 GSE109524.JUN.HUES-8 359 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 334 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 187 bp overlap
JUNB 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 123 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 93 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 180 bp overlap
MED1 6 datasets
ChIP MM1-S_BIORU GSE45984.MED1.MM1-S_BIORU 181 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 389 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 306 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 278 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 379 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 388 bp overlap
MYC 1 dataset
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 180 bp overlap
MYOD1 3 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 126 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 196 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 133 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 227 bp overlap
NCOA1 1 dataset
ChIP LS180_125 GSE39277.NCOA1.LS180_125 156 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 118 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 389 bp overlap
NR3C1 2 datasets
ChIP breast_tumor_Male_12 GSE104399.NR3C1.breast_tumor_Male_12 346 bp overlap
ChIP breast_tumor_Male_15 GSE104399.NR3C1.breast_tumor_Male_15 238 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 266 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 186 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
POLR2A 4 datasets
ChIP body of pancreas ENCFF084VJR 389 bp overlap
ChIP body of pancreas ENCFF501FEC 380 bp overlap
ChIP body of pancreas ENCFF675RCN 306 bp overlap
ChIP body of pancreas ENCFF727UBE 389 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 171 bp overlap
RBPJ 2 datasets
ChIP HCC1599 GSE116871.RBPJ.HCC1599 157 bp overlap
ChIP MUTUL GSE75503.RBPJ.MUTUL 121 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 187 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 286 bp overlap
SMARCA4 2 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 131 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 261 bp overlap
SNAI2 3 datasets
ChIP RD_shSNAI2 GSE137168.SNAI2.RD_shSNAI2 213 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 173 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 122 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 93 bp overlap
SUZ12 1 dataset
ChIP WA01 ENCSR000ATS.SUZ12.WA01 122 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 77 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 237 bp overlap
TCF4 1 dataset
ChIP LS180_125 GSE31939.TCF4.LS180_125 96 bp overlap
TCF7L2 1 dataset
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 278 bp overlap
VDR 5 datasets
ChIP LNCaP GSE64656.VDR.LNCaP 357 bp overlap
ChIP LS180_125 GSE31939.VDR.LS180_125 347 bp overlap
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 389 bp overlap
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 389 bp overlap
ChIP primary-prostate-epithelial-cell GSE124576.VDR.primary-prostate-epithelial-cell 174 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 254 bp overlap
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