chr17 : 80,376,366 – 80,377,013
647 bp 75 TFs 9 linked genes
This 647 bp open chromatin element is linked to 9 target genes and is bound by 75 transcription factors.
Linked Genes
9 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENDOV 38.5 kb Distal Multiome
RNF213-AS1 38.5 kb Distal Multiome
RNF213 115.8 kb Distal Multiome
SLC26A11 156.2 kb Distal Multiome
SGSH 156.4 kb Distal Multiome
RPTOR 168.2 kb Distal Multiome
ENSG00000262580 170.8 kb Distal Multiome
EIF4A3 229.6 kb Distal Multiome
GAA 275.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:80,371,366 – 80,382,013
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
BCL3 2 datasets
ChIP GM12878 ENCFF854PAY 176 bp overlap
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 101 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 285 bp overlap
BRD4 3 datasets
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 111 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 357 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 209 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 109 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 278 bp overlap
DNMT3B 2 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 311 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 209 bp overlap
ELK1::HOXB13 1 dataset
Motif DE_72h DE_72h-ELK1HOXB13_MA1932.2 15 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 400 bp overlap
ERF 1 dataset
Motif DE_72h DE_72h-ERF_MA0760.2 9 bp overlap
ERF::FOXI1 1 dataset
Motif DE_72h DE_72h-ERFFOXI1_MA1935.2 10 bp overlap
ETS1 4 datasets
Motif DE_72h DE_72h-ETS1_MA0098.4 9 bp overlap
ChIP HUVEC-C_1h GSE93030.ETS1.HUVEC-C_1h 234 bp overlap
ChIP HUVEC-C_VEGF_1H GSE41166.ETS1.HUVEC-C_VEGF_1H 209 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.ETS1.HUVEC-C_VEGF_1h 234 bp overlap
ETS2 1 dataset
Motif DE_72h DE_72h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_72h DE_72h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_72h DE_72h-ETV2_MA0762.2 9 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_72h DE_72h-ETV2FOXI1_MA1942.2 11 bp overlap
Erg 1 dataset
Motif DE_72h DE_72h-Erg_MA0474.4 10 bp overlap
FIGLA 1 dataset
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FLI1::DRGX 1 dataset
Motif DE_72h DE_72h-FLI1DRGX_MA1949.2 14 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_72h DE_72h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 588 bp overlap
ChIP DE DE-FOXA2-2 647 bp overlap
FOXE1 1 dataset
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXJ2::ELF1 1 dataset
Motif DE_72h DE_72h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXP2 1 dataset
Motif DE_72h DE_72h-FOXP2_MA0593.2 9 bp overlap
GABPA 1 dataset
Motif DE_72h DE_72h-GABPA_MA0062.4 10 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 587 bp overlap
ChIP DE DE-GATA4-2 627 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 535 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 255 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 554 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 599 bp overlap
ChIP DE DE-GATA6-2 647 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 446 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 647 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 539 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 607 bp overlap
ChIP foregut GSE117136.GATA6.foregut 555 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 616 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 428 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 479 bp overlap
GLYR1 2 datasets
ChIP HeLa GSE20303.GLYR1.HeLa 223 bp overlap
ChIP HeLa GSE20303.GLYR1.HeLa 380 bp overlap
HNF4A 1 dataset
ChIP hiPSC GSE104613.HNF4A.hiPSC 216 bp overlap
IKZF1 1 dataset
Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_72h DE_72h-Ikzf3_MA1992.2 9 bp overlap
KMT2A 2 datasets
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 336 bp overlap
ChIP OCI-AML-3_VTP GSE129636.KMT2A.OCI-AML-3_VTP 235 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MITF 1 dataset
Motif DE_72h DE_72h-MITF_MA0620.4 10 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 205 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 199 bp overlap
NR4A1 1 dataset
Motif DE_72h DE_72h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif DE_72h DE_72h-NR4A2_MA0160.3 8 bp overlap
Nr1h3::Rxra 1 dataset
Motif DE_72h DE_72h-Nr1h3Rxra_MA0494.2 16 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 86 bp overlap
Pparg::Rxra 1 dataset
Motif DE_72h DE_72h-PpargRxra_MA0065.3 13 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
SIX2 1 dataset
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 334 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 647 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 399 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 535 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 582 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 297 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 326 bp overlap
SMARCA4 1 dataset
ChIP NSC GSE125033.SMARCA4.NSC 517 bp overlap
SOX10 2 datasets
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 501 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 647 bp overlap
SOX4 1 dataset
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
SREBF1 4 datasets
ChIP A-549 ENCSR897MYK.SREBF1.A-549 256 bp overlap
ChIP A549 ENCFF955FQW 345 bp overlap
Motif DE_72h DE_72h-SREBF1_MA0595.1 10 bp overlap
Motif DE_72h DE_72h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_72h DE_72h-SREBF2_MA0828.3 10 bp overlap
Sox17 1 dataset
Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_72h DE_72h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
Stat2 1 dataset
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
Stat6 1 dataset
Motif DE_72h DE_72h-Stat6_MA0520.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 250 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 257 bp overlap
TCF7L1 1 dataset
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TEAD4 1 dataset
ChIP HUCCT1 GSE68296.TEAD4.HUCCT1 87 bp overlap
THRB 1 dataset
Motif DE_72h DE_72h-THRB_MA1576.2 18 bp overlap
USF1 1 dataset
Motif DE_72h DE_72h-USF1_MA0093.4 10 bp overlap
USF2 1 dataset
Motif DE_72h DE_72h-USF2_MA0526.5 10 bp overlap
ZEB1 1 dataset
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZFX 2 datasets
ChIP HEK293T ENCFF402JZW 623 bp overlap
ChIP HEK293T ENCFF402JZW 422 bp overlap
ZIC2 1 dataset
ChIP HCT-116_WT GSE127960.ZIC2.HCT-116_WT 214 bp overlap
ZNF175 1 dataset
Motif DE_72h DE_72h-ZNF175_MA2332.1 9 bp overlap
ZNF341 1 dataset
Motif DE_72h DE_72h-ZNF341_MA1655.2 8 bp overlap
ZNF675 1 dataset
Motif DE_72h DE_72h-ZNF675_MA1714.2 19 bp overlap
ZNF677 1 dataset
Motif DE_72h DE_72h-ZNF677_MA2101.1 12 bp overlap
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