chr17 : 73,718,352 – 73,718,895
543 bp 56 TFs 1 linked gene
This 543 bp open chromatin element is linked to SDK2 and is bound by 56 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SDK2 74.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:73,713,352 – 73,723,895
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 102 bp overlap
CCDC6 1 dataset
ChIP HepG2 ENCFF751JSA 88 bp overlap
CTCF 2 datasets
Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap
Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap
Crx 4 datasets
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
EBF1 1 dataset
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 298 bp overlap
ESRRA 1 dataset
ChIP HepG2 ENCFF033DVS 123 bp overlap
EZH2 2 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 330 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 55 bp overlap
Ebf4 1 dataset
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
FIGLA 3 datasets
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 543 bp overlap
ChIP DE DE-GATA4-2 543 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 543 bp overlap
ChIP DE DE-GATA6-2 492 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 467 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 534 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 511 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 543 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 543 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 512 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 543 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 58 bp overlap
GSC 4 datasets
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 4 datasets
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
HNF4A 3 datasets
ChIP KATO-III GSE114018.HNF4A.KATO-III 117 bp overlap
ChIP liver ENCFF354NRH 61 bp overlap
ChIP liver ENCFF449HPV 104 bp overlap
HNF4G 1 dataset
ChIP liver ENCFF170YNZ 79 bp overlap
JUN 1 dataset
ChIP DE_D2 S54-DE-d2-JUN-exp2 308 bp overlap
MAX 3 datasets
ChIP HepG2 ENCFF479OHI 102 bp overlap
ChIP HepG2 ENCFF507HCX 145 bp overlap
ChIP liver ENCFF092GVW 111 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 247 bp overlap
NR2C2 1 dataset
ChIP HepG2 ENCFF944PRH 166 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 69 bp overlap
ChIP K562 ENCFF221HJH 91 bp overlap
NR2F2 2 datasets
ChIP liver ENCFF427MRU 78 bp overlap
ChIP liver ENCFF565JGD 83 bp overlap
OTX1 4 datasets
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
PHF21A 1 dataset
ChIP HepG2 ENCFF525EUW 128 bp overlap
PITX1 4 datasets
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX2 4 datasets
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
PITX3 5 datasets
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 295 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 138 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 110 bp overlap
RHOXF1 4 datasets
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 120 bp overlap
RXRB 1 dataset
ChIP HepG2 ENCFF539ZAY 68 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 357 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 319 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 439 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 543 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 542 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 452 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 420 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 484 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 415 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 543 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 543 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 543 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 146 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 113 bp overlap
ChIP liver ENCFF769YSM 135 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 149 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 197 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 134 bp overlap
TFAP2A 1 dataset
Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 56 bp overlap
ZBTB32 1 dataset
Motif DE_36h DE_36h-ZBTB32_MA1580.1 10 bp overlap
ZBTB7C 3 datasets
Motif DE_36h DE_36h-ZBTB7C_MA0695.2 8 bp overlap
Motif DE_36h DE_36h-ZBTB7C_MA0695.2 8 bp overlap
Motif DE_36h DE_36h-ZBTB7C_MA0695.2 8 bp overlap
ZEB1 3 datasets
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 322 bp overlap
ZKSCAN3 6 datasets
Motif DE_36h DE_36h-ZKSCAN3_MA1973.2 14 bp overlap
Motif DE_36h DE_36h-ZKSCAN3_MA1973.2 14 bp overlap
Motif DE_36h DE_36h-ZKSCAN3_MA1973.2 14 bp overlap
Motif DE_36h DE_36h-ZKSCAN3_MA1973.2 14 bp overlap
ChIP K562 ENCFF709FGV 345 bp overlap
ChIP K562 ENCFF709FGV 319 bp overlap
ZNF217 1 dataset
ChIP HepG2 ENCFF455XGO 133 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 141 bp overlap
ZNF324 3 datasets
Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap
Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap
Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap
ZNF48 1 dataset
ChIP HepG2 ENCFF362CDQ 108 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 97 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 62 bp overlap
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