chr17 : 36,880,130 36,880,730
600 bp 47 TFs 3 linked genes
This 600 bp open chromatin element is linked to LHX1-DT, LHX1, and AATF and is bound by 47 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
LHX1-DT 56.2 kb Distal Multiome
LHX1 56.3 kb Distal Multiome
AATF 68.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:36,875,130 – 36,885,730
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
BACH1 2 datasets
ChIP AsPC-1 GSE124406.BACH1.AsPC-1 231 bp overlap
ChIP SW1990 GSE124406.BACH1.SW1990 121 bp overlap
BCL3 2 datasets
ChIP GM12878 ENCFF854PAY 176 bp overlap
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 106 bp overlap
BRD4 3 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 126 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 233 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 152 bp overlap
BRD9 1 dataset
ChIP Mel270_DMSO GSE124720.BRD9.Mel270_DMSO 103 bp overlap
CREB1 1 dataset
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 164 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 284 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 130 bp overlap
FOS 4 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 155 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 108 bp overlap
ChIP MCF-7 ENCFF282FWZ 236 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 160 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 244 bp overlap
ChIP K562 ENCFF455MKD 446 bp overlap
FOSL2 2 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 163 bp overlap
ChIP A549 ENCFF195CES 206 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 255 bp overlap
ChIP DE DE-FOXA2-1 541 bp overlap
ChIP DE DE-FOXA2-2 515 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 182 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 185 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 600 bp overlap
ChIP DE DE-GATA4-2 590 bp overlap
ChIP foregut GSE117136.GATA4.foregut 343 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 332 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 254 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 546 bp overlap
ChIP DE DE-GATA6-2 600 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 566 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 523 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 518 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 482 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 575 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 600 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 550 bp overlap
ChIP foregut GSE117136.GATA6.foregut 338 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 477 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 301 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 432 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 251 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 195 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 315 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 351 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 225 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 319 bp overlap
MAFF 1 dataset
ChIP K562 ENCFF071YKK 146 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 277 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 236 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 262 bp overlap
MITF 4 datasets
ChIP 501-mel GSE137522.MITF.501-mel 75 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 77 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 82 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 51 bp overlap
NFE2 5 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 263 bp overlap
ChIP K-562 ENCSR552YGL.NFE2.K-562 227 bp overlap
ChIP K-562 ENCSR000FAF.NFE2.K-562 89 bp overlap
ChIP K562 ENCFF047YKA 232 bp overlap
ChIP K562 ENCFF163BSI 163 bp overlap
NFE2L2 3 datasets
ChIP A-549 ENCSR584GHV.NFE2L2.A-549 85 bp overlap
ChIP Hep-G2 ENCSR488EES.NFE2L2.Hep-G2 101 bp overlap
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 77 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 72 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 56 bp overlap
RAD51 1 dataset
ChIP K562 ENCFF133ELP 100 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 77 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 522 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 439 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 375 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 145 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 132 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 217 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 330 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 53 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 84 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 259 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 51 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 262 bp overlap
ChIP K562 ENCFF616RIL 237 bp overlap
USF1 1 dataset
ChIP K-562 ENCSR000BKT.USF1.K-562 73 bp overlap
USF2 1 dataset
ChIP K562 ENCFF306QPU 126 bp overlap
VDR 1 dataset
ChIP primary-prostate-epithelial-cell GSE124576.VDR.primary-prostate-epithelial-cell 73 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 278 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 276 bp overlap
ZNF175 1 dataset
ChIP HEK293 GSE76494.ZNF175.HEK293 181 bp overlap