chr17 : 8,313,329 8,313,824
495 bp 30 TFs 11 linked genes
This 495 bp open chromatin element is linked to 11 target genes and is bound by 30 transcription factors.
Linked Genes
11 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ARHGEF15 3.0 kb Proximal Proximity
RANGRF 24.9 kb Distal Multiome
KRBA2 63.1 kb Distal Multiome
PFAS 64.3 kb Distal Multiome
CTC1 65.5 kb Distal Multiome
RPL26 69.6 kb Distal Multiome
AURKB 103.0 kb Distal Multiome
NDEL1 122.3 kb Distal Multiome
TMEM107 137.2 kb Distal Multiome
VAMP2 150.6 kb Distal Multiome
PER1 157.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:8,308,329 – 8,318,824
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 140 bp overlap
AR 1 dataset
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 184 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 160 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 132 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 221 bp overlap
DDX21 1 dataset
ChIP A-375_1726plus GSE128080.DDX21.A-375_1726plus 76 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 76 bp overlap
EZH2 8 datasets
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 321 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 257 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 70 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 304 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 90 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 181 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 427 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 260 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 146 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 158 bp overlap
GATA2 6 datasets
ChIP K-562 ENCSR000EWG.GATA2.K-562 134 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 182 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 182 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 202 bp overlap
ChIP SH-SY5Y ENCFF485YIB 300 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 344 bp overlap
GATA3 3 datasets
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 140 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 196 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 172 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 315 bp overlap
ChIP DE DE-GATA4-2 429 bp overlap
ChIP foregut GSE117136.GATA4.foregut 310 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 303 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 356 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 267 bp overlap
ChIP DE DE-GATA6-2 347 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 369 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 362 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 437 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 253 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 369 bp overlap
ChIP foregut GSE117136.GATA6.foregut 336 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 248 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 246 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 406 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 244 bp overlap
HCFC1 4 datasets
ChIP K-562 ENCSR000EFN.HCFC1.K-562 134 bp overlap
ChIP K562 ENCFF959WVM 164 bp overlap
ChIP MCF-7 ENCFF595ZTV 276 bp overlap
ChIP MCF-7 ENCSR697CUP.HCFC1.MCF-7 180 bp overlap
KDM1A 1 dataset
ChIP HepG2 ENCFF240UWG 70 bp overlap
KLF10 1 dataset
ChIP Hep-G2 GSE97661.KLF10.Hep-G2 88 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 129 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 94 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 129 bp overlap
SIX5 2 datasets
ChIP H1 ENCFF942SOJ 177 bp overlap
ChIP K-562 ENCSR000BGX.SIX5.K-562 102 bp overlap
SUZ12 3 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 194 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 273 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.SUZ12.Karpas-422_CPI360-D4 66 bp overlap
THAP11 2 datasets
ChIP HEK293 GSE138205.THAP11.HEK293 65 bp overlap
ChIP HepG2 ENCFF272SWH 131 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 301 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 178 bp overlap
ZNF143 13 datasets
ChIP CUTLL1 GSE29600.ZNF143.CUTLL1 122 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 120 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 129 bp overlap
ChIP HEK293T GSE39263.ZNF143.HEK293T 146 bp overlap
ChIP HeLa GSE39263.ZNF143.HeLa 129 bp overlap
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 107 bp overlap
ChIP Hep-G2 ENCSR101FJT.ZNF143.Hep-G2 126 bp overlap
ChIP K-562 ENCSR000EGP.ZNF143.K-562 107 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 258 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 226 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 112 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 150 bp overlap
ChIP WTC11 ENCFF249JUK 238 bp overlap