chr16 : 51,759,351 – 51,759,738
387 bp 51 TFs 1 linked gene
This 387 bp open chromatin element is linked to LINC01571 and is bound by 51 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01571 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:51,754,351 – 51,764,738
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 184 bp overlap
BRD4 9 datasets
ChIP BE2C GSE80151.BRD4.BE2C 208 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 186 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 201 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 387 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 208 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 387 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 320 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 188 bp overlap
ChIP thyroid-cancer GSE114068.BRD4.thyroid-cancer 239 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 321 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 338 bp overlap
CTCF 1 dataset
ChIP brain ENCFF099ASU 241 bp overlap
EBF3_P177L 1 dataset
ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 310 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 273 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 245 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 387 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 230 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 85 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 387 bp overlap
ChIP DE DE-FOXA2-2 387 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 377 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 339 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 387 bp overlap
ChIP SK-N-SH ENCFF764OZD 287 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 387 bp overlap
GATA3 10 datasets
ChIP BE2C GSE65664.GATA3.BE2C 220 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 295 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 328 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 166 bp overlap
ChIP NGP GSE65664.GATA3.NGP 237 bp overlap
ChIP SH-SY5Y ENCFF475HYF 364 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 387 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 312 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 294 bp overlap
ChIP SK-N-SH ENCFF040SSB 344 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 387 bp overlap
ChIP DE DE-GATA4-2 387 bp overlap
ChIP foregut GSE117136.GATA4.foregut 284 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 356 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 387 bp overlap
ChIP DE DE-GATA6-2 387 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 387 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 387 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 387 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 387 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 387 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 387 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 387 bp overlap
ChIP foregut GSE117136.GATA6.foregut 352 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 387 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 387 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 387 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 387 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 387 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 379 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 387 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 216 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 320 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 292 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 387 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 143 bp overlap
MYCN 8 datasets
ChIP BE2C GSE80151.MYCN.BE2C 279 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 314 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 307 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 255 bp overlap
ChIP NGP GSE80151.MYCN.NGP 243 bp overlap
ChIP NGP GSE80151.MYCN.NGP 243 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 279 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 201 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 387 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 127 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 249 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 195 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 387 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 349 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 387 bp overlap
POLR2A 1 dataset
ChIP thyroid gland ENCFF979LRR 312 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 106 bp overlap
RAD21 3 datasets
ChIP IMR-5 GSE78957.RAD21.IMR-5 133 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 387 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 194 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 364 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 52 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 370 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 387 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 387 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 387 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 387 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 387 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 387 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 387 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 143 bp overlap
SMARCA4 3 datasets
ChIP NGP GSE134626.SMARCA4.NGP 302 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 387 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 387 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 229 bp overlap
SMARCC1 3 datasets
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 310 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 387 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 216 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 370 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 183 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 295 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 387 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 294 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 242 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 351 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 240 bp overlap
ChIP SK-N-SH ENCFF270OWF 387 bp overlap
TEAD4 3 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 387 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 387 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 178 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 359 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 372 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 183 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 319 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 319 bp overlap
ZFP3 2 datasets
ChIP HEK293 ENCFF345CRU 246 bp overlap
ChIP HEK293 ENCSR134QIE.ZFP3.HEK293 256 bp overlap
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