chr15 : 97,316,363 – 97,316,681

318 bp 79 TFs 0 linked genes

This 318 bp open chromatin element has no linked target genes and is bound by 79 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

79 transcription factors

Alx4 1 dataset

Motif DE_12h DE_12h-Alx4_MA0853.2 12 bp overlap

BRD4 5 datasets

ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 193 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 221 bp overlap

ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 214 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 318 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 318 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 182 bp overlap

CTCF 1 dataset

ChIP hESC_D80 GSE116862.CTCF.hESC_D80 209 bp overlap

CUX1 1 dataset

Motif DE_12h DE_12h-CUX1_MA0754.3 9 bp overlap

CUX2 1 dataset

Motif DE_12h DE_12h-CUX2_MA0755.2 9 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

ELF3 1 dataset

ChIP PDAC GSE64557.ELF3.PDAC 224 bp overlap

ESR1 2 datasets

ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 318 bp overlap

ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 231 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 260 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

FOS 3 datasets

ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 206 bp overlap

ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 119 bp overlap

ChIP leiomyoma_PT1063 GSE128230.FOS.leiomyoma_PT1063 70 bp overlap

FOSL2 1 dataset

ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 225 bp overlap

FOXA1 2 datasets

ChIP PDAC GSE64557.FOXA1.PDAC 213 bp overlap

ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 175 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

FOXE1 1 dataset

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

GATA2 1 dataset

ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 187 bp overlap

HIC1 2 datasets

ChIP HEK293 ENCFF252CFL 218 bp overlap

ChIP HEK293 ENCSR803GYT.HIC1.HEK293 318 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

HIF1A 1 dataset

ChIP PC-3_siOC2 GSE106305.HIF1A.PC-3_siOC2 167 bp overlap

Hand1::Tcf3 1 dataset

Motif DE_12h DE_12h-Hand1Tcf3_MA0092.2 9 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

ISL2 1 dataset

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

JUNB 1 dataset

ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 71 bp overlap

KLF10 1 dataset

ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 188 bp overlap

KLF8 2 datasets

ChIP HEK293 ENCFF929IAJ 286 bp overlap

ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 210 bp overlap

Lhx3 1 dataset

Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap

MEIS2 1 dataset

Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap

MSANTD3 1 dataset

Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

MXI1 1 dataset

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

MYC 1 dataset

ChIP HeLa GSE44672.MYC.HeLa 259 bp overlap

NKX2-1 2 datasets

ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 318 bp overlap

ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 150 bp overlap

NKX2-5 2 datasets

ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 312 bp overlap

ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 183 bp overlap

NR4A1 1 dataset

Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap

NR4A2 1 dataset

Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap

NUP98-HOXA9 1 dataset

ChIP HEK293-FT GSE62586.NUP98-HOXA9.HEK293-FT 154 bp overlap

ONECUT1 1 dataset

Motif DE_12h DE_12h-ONECUT1_MA0679.3 9 bp overlap

ONECUT3 1 dataset

Motif DE_12h DE_12h-ONECUT3_MA0757.2 12 bp overlap

PAX3 1 dataset

Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 254 bp overlap

PBX2 1 dataset

Motif DE_12h DE_12h-PBX2_MA1113.3 9 bp overlap

PDX1 5 datasets

ChIP hESC GSE58685.PDX1.hESC 163 bp overlap

ChIP hiPSC GSE125768.PDX1.hiPSC 243 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 204 bp overlap

ChIP islet ERP001456.PDX1.islet 193 bp overlap

ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 318 bp overlap

PKNOX1 5 datasets

ChIP HEK293T ENCFF174WDB 172 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 236 bp overlap

ChIP MCF-7 ENCFF116OCS 258 bp overlap

ChIP MCF-7 ENCFF116OCS 50 bp overlap

ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 143 bp overlap

PRDM9 1 dataset

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

Pax7 1 dataset

Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

SATB1 1 dataset

ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 57 bp overlap

SETDB1 4 datasets

ChIP HEK293 ENCFF676PLV 318 bp overlap

ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 250 bp overlap

ChIP U2OS ENCSR000EYD.SETDB1.U2OS 271 bp overlap

SIX2 3 datasets

ChIP HEK GSE73865.SIX2.HEK 161 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 131 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 159 bp overlap

SMAD2 1 dataset

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

SMAD3 1 dataset

ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 75 bp overlap

SMAD3-HIF1A 1 dataset

ChIP PC-3_hypoxia GSE106305.SMAD3-HIF1A.PC-3_hypoxia 149 bp overlap

SMARCA2 1 dataset

ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 232 bp overlap

SMARCA4 4 datasets

ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 222 bp overlap

ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 313 bp overlap

ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 234 bp overlap

ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 318 bp overlap

SMARCB1 2 datasets

ChIP TTC-1240_R377H GSE124903.SMARCB1.TTC-1240_R377H 179 bp overlap

ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCB1.TTC-1240_SMARCB1-FL 197 bp overlap

SMARCC1 4 datasets

ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 210 bp overlap

ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 216 bp overlap

ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 219 bp overlap

ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 299 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 230 bp overlap

SP3 1 dataset

ChIP HEK293 ENCSR141PZA.SP3.HEK293 253 bp overlap

SP5_Zebrafish 2 datasets

ChIP HEK293_Zebrafish_dDBD GSE121316.SP5_Zebrafish.HEK293_Zebrafish_dDBD 218 bp overlap

ChIP HEK293_dDBD GSE110277.SP5_Zebrafish.HEK293_dDBD 201 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

STAT3 2 datasets

ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 119 bp overlap

ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 130 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

TBX5 3 datasets

ChIP G296S_4 GSE85628.TBX5.G296S_4 225 bp overlap

ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 254 bp overlap

ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 134 bp overlap

TFAP4 1 dataset

Motif DE_12h DE_12h-TFAP4_MA1570.1 10 bp overlap

TP53 1 dataset

ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 68 bp overlap

TRIM28 5 datasets

ChIP HEK293 ENCFF265CEM 318 bp overlap

ChIP HEK293 ENCFF582MWI 318 bp overlap

ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 318 bp overlap

ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 252 bp overlap

ChIP U2OS ENCSR000EYC.TRIM28.U2OS 252 bp overlap

Tcf21 1 dataset

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

USF1 1 dataset

Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap

WT1 2 datasets

ChIP HEK293 ENCFF906HIR 304 bp overlap

ChIP HEK293 ENCSR966PJJ.WT1.HEK293 234 bp overlap

ZFP37 1 dataset

ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 242 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF189 2 datasets

ChIP HEK293 ENCFF638TIB 318 bp overlap

ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 272 bp overlap

ZNF214 1 dataset

Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap

ZNF274 1 dataset

Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 223 bp overlap

ZNF701 1 dataset

Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap