chr14 : 20,732,350 – 20,732,945
595 bp 51 TFs 10 linked genes
This 595 bp open chromatin element is linked to 10 target genes and is bound by 51 transcription factors.
Linked Genes
10 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
EGILA 25.5 kb Distal Multiome
ANG 48.0 kb Distal Multiome
RNASE4 48.1 kb Distal Multiome
RNASE1 70.2 kb Distal Multiome+HiCAR
METTL17 257.4 kb Distal Multiome
PNP 263.2 kb Distal Multiome
PIP4P1 271.2 kb Distal Multiome
APEX1 277.4 kb Distal Multiome
OSGEP 277.6 kb Distal Multiome
NDRG2 293.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:20,727,350 – 20,737,945
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap
Bcl11B 1 dataset
Motif DE_48h DE_48h-Bcl11B_MA1989.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 351 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap
Elf5 1 dataset
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 482 bp overlap
GATA1::TAL1 1 dataset
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 526 bp overlap
ChIP DE DE-GATA4-2 510 bp overlap
ChIP foregut GSE117136.GATA4.foregut 367 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 552 bp overlap
ChIP DE DE-GATA6-2 523 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 266 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 493 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 433 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 436 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 437 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 286 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 430 bp overlap
ChIP foregut GSE117136.GATA6.foregut 272 bp overlap
Hnf1A 1 dataset
Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 2 datasets
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 253 bp overlap
MEIS1 1 dataset
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap
MXI1 2 datasets
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap
Msgn1 1 dataset
Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 88 bp overlap
Nr1h3::Rxra 1 dataset
Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr2F6 1 dataset
Motif DE_48h DE_48h-Nr2F6_MA0728.1 15 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 432 bp overlap
PRDM9 1 dataset
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
RUNX2 1 dataset
Motif DE_48h DE_48h-RUNX2_MA0511.2 9 bp overlap
RUNX3 1 dataset
Motif DE_48h DE_48h-RUNX3_MA0684.3 8 bp overlap
Rarb 1 dataset
Motif DE_48h DE_48h-Rarb_MA0857.1 16 bp overlap
Rarg 2 datasets
Motif DE_48h DE_48h-Rarg_MA0859.2 15 bp overlap
Motif DE_48h DE_48h-Rarg_MA0860.1 17 bp overlap
Runx1 1 dataset
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 490 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 290 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 472 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 382 bp overlap
SOX10 1 dataset
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
SOX12 1 dataset
Motif DE_48h DE_48h-SOX12_MA1561.2 10 bp overlap
SOX14 1 dataset
Motif DE_48h DE_48h-SOX14_MA1562.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 453 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 507 bp overlap
SOX4 1 dataset
Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap
SP5 1 dataset
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
SREBF1 1 dataset
Motif DE_48h DE_48h-SREBF1_MA0595.1 10 bp overlap
SRY 1 dataset
Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap
Sox11 1 dataset
Motif DE_48h DE_48h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap
Sox5 2 datasets
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
TCF7L1 1 dataset
Motif DE_48h DE_48h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap
THRB 1 dataset
Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap
ZKSCAN5 2 datasets
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF143 1 dataset
Motif DE_48h DE_48h-ZNF143_MA0088.2 16 bp overlap
ZNF148 1 dataset
Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap
ZNF418 1 dataset
Motif DE_48h DE_48h-ZNF418_MA1980.1 15 bp overlap
ZNF76 1 dataset
Motif DE_48h DE_48h-ZNF76_MA1716.2 17 bp overlap
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