chr13 : 110,338,292 110,338,962
670 bp 54 TFs 0 linked genes
This 670 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:110,333,292 – 110,343,962
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
AR 8 datasets
ChIP prostate GSE56288.AR.prostate 274 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 211 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 245 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 234 bp overlap
ChIP prostate_P1 GSE130408.AR.prostate_P1 259 bp overlap
ChIP prostate_P1_T GSE130408.AR.prostate_P1_T 137 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 214 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 487 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 231 bp overlap
BRD4 3 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 638 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 187 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 410 bp overlap
CDK8 7 datasets
ChIP leiomyoma_PT848 GSE128230.CDK8.leiomyoma_PT848 246 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 91 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 407 bp overlap
ChIP leiomyoma_PT916 GSE128230.CDK8.leiomyoma_PT916 73 bp overlap
ChIP myometrium_PT1063 GSE128230.CDK8.myometrium_PT1063 200 bp overlap
ChIP myometrium_PT848 GSE128230.CDK8.myometrium_PT848 69 bp overlap
ChIP myometrium_PT886 GSE128230.CDK8.myometrium_PT886 71 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 363 bp overlap
CTCF 2 datasets
ChIP chondrocyte ENCFF134ORZ 543 bp overlap
ChIP nerve_tibial ENCSR434XLP.CTCF.nerve_tibial 263 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 183 bp overlap
EP300 9 datasets
ChIP esophagus muscularis mucosa ENCFF406RGZ 241 bp overlap
ChIP gastroesophageal sphincter ENCFF211FPL 251 bp overlap
ChIP sigmoid colon ENCFF524QSR 236 bp overlap
ChIP sigmoid colon ENCFF682PXQ 174 bp overlap
ChIP sigmoid colon ENCFF953ZIP 67 bp overlap
ChIP stomach ENCFF818VAB 257 bp overlap
ChIP suprapubic skin ENCFF262SZA 385 bp overlap
ChIP tibial nerve ENCFF346AYA 511 bp overlap
ChIP tibial nerve ENCFF952OPK 317 bp overlap
ESR1 3 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 255 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 324 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 273 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 241 bp overlap
FOS 3 datasets
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 204 bp overlap
ChIP leiomyoma_PT967 GSE128230.FOS.leiomyoma_PT967 79 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 115 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 330 bp overlap
ChIP DE DE-FOXA2-2 397 bp overlap
FOXL2 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 282 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 300 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 193 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 263 bp overlap
FOXN3 2 datasets
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
FOXP2 2 datasets
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap
GATA2 5 datasets
ChIP ESF GSE108408.GATA2.ESF 390 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 116 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 250 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 393 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 486 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 437 bp overlap
ChIP DE DE-GATA4-2 601 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 340 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 570 bp overlap
ChIP DE DE-GATA6-2 655 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 473 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 342 bp overlap
ChIP foregut GSE117136.GATA6.foregut 342 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 342 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCFF682IKN 345 bp overlap
MED1 7 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 205 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 478 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 294 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 232 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 252 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 282 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 302 bp overlap
MED12 7 datasets
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 167 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 331 bp overlap
ChIP leiomyoma_PT916 GSE128230.MED12.leiomyoma_PT916 151 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 274 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 107 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 144 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 88 bp overlap
MSANTD3 2 datasets
Motif DE_48h DE_48h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_60h DE_60h-MSANTD3_MA1523.2 7 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 318 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 398 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NR2F2 4 datasets
ChIP liver ENCFF565JGD 471 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 311 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 261 bp overlap
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 231 bp overlap
PGR 4 datasets
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 128 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 496 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 424 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 196 bp overlap
POLR2A 27 datasets
ChIP IMR-90 ENCFF672YWV 601 bp overlap
ChIP IMR-90 ENCFF672YWV 449 bp overlap
ChIP esophagus muscularis mucosa ENCFF432ZCY 217 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 375 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 288 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 509 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 406 bp overlap
ChIP prostate gland ENCFF545MVF 359 bp overlap
ChIP prostate gland ENCFF881OMH 309 bp overlap
ChIP sigmoid colon ENCFF101ILL 307 bp overlap
ChIP sigmoid colon ENCFF653CQA 340 bp overlap
ChIP sigmoid colon ENCFF653CQA 136 bp overlap
ChIP sigmoid colon ENCFF661AMI 357 bp overlap
ChIP sigmoid colon ENCFF725QFT 372 bp overlap
ChIP sigmoid colon ENCFF748YVT 320 bp overlap
ChIP sigmoid colon ENCFF754JQR 271 bp overlap
ChIP spleen ENCFF044PYR 211 bp overlap
ChIP spleen ENCFF446ZGT 231 bp overlap
ChIP stomach ENCFF278MYS 241 bp overlap
ChIP stomach ENCFF820WZN 345 bp overlap
ChIP thyroid gland ENCFF979LRR 209 bp overlap
ChIP transverse colon ENCFF607LKE 354 bp overlap
ChIP transverse colon ENCFF610RWV 386 bp overlap
ChIP transverse colon ENCFF840PXT 321 bp overlap
ChIP vagina ENCFF305NWS 328 bp overlap
ChIP vagina ENCFF384GAB 511 bp overlap
ChIP vagina ENCFF384GAB 303 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 208 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 117 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 173 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 370 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 590 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 277 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 384 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 450 bp overlap
SMARCA4 4 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 599 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 199 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 208 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 280 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 476 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 475 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 402 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 214 bp overlap
Stat4 1 dataset
Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 312 bp overlap
ZBTB16 1 dataset
ChIP hESC GSE75115.ZBTB16.hESC 148 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 311 bp overlap
ZNF460 1 dataset
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 136 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 146 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 233 bp overlap
ZSCAN4 2 datasets
Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Zfx 1 dataset
Motif DE_60h DE_60h-Zfx_MA0146.3 10 bp overlap