chr13 : 98,665,738 98,666,239
501 bp 51 TFs 0 linked genes
This 501 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:98,660,738 – 98,671,239
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 336 bp overlap
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 132 bp overlap
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 97 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 201 bp overlap
BRD2 1 dataset
ChIP HUVEC-C GSE60171.BRD2.HUVEC-C 225 bp overlap
BRD4 1 dataset
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 204 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 148 bp overlap
CTCF 1 dataset
ChIP Caco-2 ENCFF934QYS 213 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF460KDD 251 bp overlap
ChIP BLaER1 ENCFF896HSY 272 bp overlap
ESR1 32 datasets
ChIP MCF-7 GSE148277.ESR1.MCF-7 170 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 200 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 119 bp overlap
ChIP MCF-7 ERP000209.ESR1.MCF-7 105 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 132 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 161 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 110 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 147 bp overlap
ChIP MCF-7_E2 GSE71276.ESR1.MCF-7_E2 182 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 111 bp overlap
ChIP MCF-7_E2-320min-ERalpha GSE94023.ESR1.MCF-7_E2-320min-ERalpha 103 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 161 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 168 bp overlap
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 100 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 205 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 160 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 135 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 140 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 151 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 171 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 149 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 117 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 145 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 247 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 186 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 167 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 273 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 192 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 278 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 171 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 316 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 205 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 239 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 178 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 194 bp overlap
FOXA1 8 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 209 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 61 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 91 bp overlap
ChIP liver ENCFF749ERP 147 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 81 bp overlap
ChIP liver ERP002306.FOXA1.liver 100 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 292 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 169 bp overlap
FOXA2 8 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 164 bp overlap
ChIP DE DE-FOXA2-1 326 bp overlap
ChIP DE DE-FOXA2-2 324 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 96 bp overlap
ChIP liver ENCFF877SFI 220 bp overlap
ChIP liver ENCFF888VJF 259 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 189 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 227 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 286 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 339 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 243 bp overlap
ChIP DE DE-GATA6-2 75 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 232 bp overlap
HNF1B 2 datasets
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 94 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 88 bp overlap
HNF4A 7 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 202 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 98 bp overlap
ChIP hiPSC GSE104613.HNF4A.hiPSC 216 bp overlap
ChIP liver ENCFF354NRH 156 bp overlap
ChIP liver ENCFF449HPV 213 bp overlap
ChIP liver ENCFF449HPV 441 bp overlap
ChIP liver ERP002306.HNF4A.liver 187 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 214 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 78 bp overlap
JUND 1 dataset
ChIP liver ENCSR196HGZ.JUND.liver 153 bp overlap
MED1 1 dataset
ChIP HCT-116 GSE121798.MED1.HCT-116 260 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 127 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 119 bp overlap
NKX2-1 2 datasets
ChIP NCI-H2087 GSE39998.NKX2-1.NCI-H2087 91 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 204 bp overlap
NR2F2 3 datasets
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 181 bp overlap
ChIP liver ENCFF565JGD 307 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 233 bp overlap
NR2F6 1 dataset
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 203 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 202 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 89 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 95 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 194 bp overlap
PPARG 3 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 227 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 157 bp overlap
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 147 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 105 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 261 bp overlap
REST 2 datasets
ChIP liver ENCFF240FWT 92 bp overlap
ChIP liver ENCFF240FWT 326 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 210 bp overlap
RXRA 4 datasets
ChIP Hep-G2 ENCSR000BHU.RXRA.Hep-G2 127 bp overlap
ChIP JMSU-1 GSE107734.RXRA.JMSU-1 166 bp overlap
ChIP liver ENCFF077DAP 187 bp overlap
ChIP liver ENCFF807CIA 204 bp overlap
SMAD3 4 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 197 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 203 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 238 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 142 bp overlap
SOX13 2 datasets
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 249 bp overlap
ChIP HepG2 ENCFF062VSQ 268 bp overlap
SOX2 2 datasets
ChIP KNS-62 GSE137459.SOX2.KNS-62 95 bp overlap
ChIP TT GSE46837.SOX2.TT 176 bp overlap
SOX4 1 dataset
ChIP HCC1954 GSE104760.SOX4.HCC1954 214 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 280 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 213 bp overlap
ChIP HepG2 ENCFF767OCK 372 bp overlap
SP1 3 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 144 bp overlap
ChIP liver ENCFF597LFJ 188 bp overlap
ChIP liver ENCFF769YSM 222 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 158 bp overlap
STAT3 1 dataset
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 141 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 136 bp overlap
YY1 2 datasets
ChIP liver ENCFF515BWJ 336 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 190 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 113 bp overlap
ZNF585B 1 dataset
ChIP HEK293 ENCFF657XIZ 381 bp overlap