chr13 : 94,298,282 – 94,298,943

661 bp 61 TFs 0 linked genes

This 661 bp open chromatin element has no linked target genes and is bound by 61 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

61 transcription factors

BARX2 1 dataset

Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap

BHLHE22 2 datasets

Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap

Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap

BRCA1 1 dataset

ChIP K-562 ENCSR223MLH.BRCA1.K-562 409 bp overlap

Bhlha15 2 datasets

Motif DE_36h DE_36h-Bhlha15_MA1472.3 8 bp overlap

Motif DE_48h DE_48h-Bhlha15_MA1472.3 8 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 394 bp overlap

CHD8 1 dataset

ChIP T-47D_R5020_5 GSE62428.CHD8.T-47D_R5020_5 191 bp overlap

ELF1 2 datasets

ChIP A-549 GSE122203.ELF1.A-549 122 bp overlap

ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 112 bp overlap

ELF3 1 dataset

ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 427 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 154 bp overlap

ETV1 1 dataset

Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap

ETV2::FIGLA 2 datasets

Motif DE_36h DE_36h-ETV2FIGLA_MA1941.2 13 bp overlap

Motif DE_48h DE_48h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_48h DE_48h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV5::FIGLA 2 datasets

Motif DE_36h DE_36h-ETV5FIGLA_MA1945.2 14 bp overlap

Motif DE_48h DE_48h-ETV5FIGLA_MA1945.2 14 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_48h DE_48h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA2 1 dataset

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 350 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_48h DE_48h-FOXO1FLI1_MA1956.2 13 bp overlap

GATA2 2 datasets

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 216 bp overlap

ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 242 bp overlap

GATA3 1 dataset

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 345 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 531 bp overlap

ChIP DE DE-GATA4-2 564 bp overlap

ChIP foregut GSE117136.GATA4.foregut 519 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 387 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 442 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 435 bp overlap

ChIP DE DE-GATA6-2 466 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 661 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 661 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 624 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 606 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 661 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 470 bp overlap

HAND2 1 dataset

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 306 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap

HIF1A 1 dataset

ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 269 bp overlap

HSF1 1 dataset

ChIP MO91_27A_20UM GSE45852.HSF1.MO91_27A_20UM 175 bp overlap

IKZF2 1 dataset

Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 571 bp overlap

Ikzf3 1 dataset

Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 350 bp overlap

MYF5 2 datasets

Motif DE_36h DE_36h-MYF5_MA1641.2 8 bp overlap

Motif DE_48h DE_48h-MYF5_MA1641.2 8 bp overlap

MYOD1 6 datasets

Motif DE_36h DE_36h-MYOD1_MA0499.3 9 bp overlap

Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 279 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 262 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 261 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 212 bp overlap

NEUROD1 2 datasets

Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap

Motif DE_48h DE_48h-NEUROD1_MA1109.2 8 bp overlap

NFYA 1 dataset

Motif DE_48h DE_48h-NFYA_MA0060.4 8 bp overlap

NFYB 1 dataset

Motif DE_48h DE_48h-NFYB_MA0502.3 9 bp overlap

NFYC 1 dataset

Motif DE_48h DE_48h-NFYC_MA1644.2 7 bp overlap

NHLH2 2 datasets

Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap

Motif DE_48h DE_48h-NHLH2_MA1529.2 16 bp overlap

NKX2-5 1 dataset

ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 246 bp overlap

Neurod2 4 datasets

Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap

Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap

Motif DE_48h DE_48h-Neurod2_MA0668.3 8 bp overlap

Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap

Olig2 2 datasets

Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap

Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap

PDX1 3 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 287 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 235 bp overlap

ChIP islet ERP001456.PDX1.islet 154 bp overlap

PHF19 1 dataset

ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 268 bp overlap

Ptf1A 2 datasets

Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap

Motif DE_48h DE_48h-Ptf1A_MA1619.2 8 bp overlap

RXRB 2 datasets

Motif DE_36h DE_36h-RXRB_MA0855.1 14 bp overlap

Motif DE_48h DE_48h-RXRB_MA0855.1 14 bp overlap

Rxra 2 datasets

Motif DE_36h DE_36h-Rxra_MA0512.2 14 bp overlap

Motif DE_48h DE_48h-Rxra_MA0512.2 14 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 410 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 626 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 585 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 508 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 559 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 572 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 409 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 497 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 265 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 322 bp overlap

SOX2 1 dataset

ChIP RENVM GSE49404.SOX2.RENVM 155 bp overlap

SPIC 1 dataset

Motif DE_48h DE_48h-SPIC_MA0687.2 13 bp overlap

TBX2 1 dataset

ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 264 bp overlap

TFAP4::ETV1 2 datasets

Motif DE_36h DE_36h-TFAP4ETV1_MA1966.2 13 bp overlap

Motif DE_48h DE_48h-TFAP4ETV1_MA1966.2 13 bp overlap

TFAP4::FLI1 2 datasets

Motif DE_36h DE_36h-TFAP4FLI1_MA1967.2 14 bp overlap

Motif DE_48h DE_48h-TFAP4FLI1_MA1967.2 14 bp overlap

Tcf12 2 datasets

Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap

Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap

Tfcp2l1 2 datasets

Motif DE_36h DE_36h-Tfcp2l1_MA0145.2 14 bp overlap

Motif DE_48h DE_48h-Tfcp2l1_MA0145.2 14 bp overlap

Twist2 2 datasets

Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap

Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap

ZBTB24 2 datasets

Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap

Motif DE_48h DE_48h-ZBTB24_MA2330.1 10 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 250 bp overlap

ZFP42 1 dataset

Motif DE_48h DE_48h-ZFP42_MA1651.2 13 bp overlap

ZNF449 2 datasets

Motif DE_36h DE_36h-ZNF449_MA1656.2 10 bp overlap

Motif DE_48h DE_48h-ZNF449_MA1656.2 10 bp overlap

ZNF550 1 dataset

ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 202 bp overlap

Zfp335 2 datasets

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap

Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap