chr13 : 85,650,727 – 85,651,097
370 bp 60 TFs 0 linked genes
This 370 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:85,645,727 – 85,656,097
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast-cancer_ENOB-2852 GSE128018.AR.breast-cancer_ENOB-2852 52 bp overlap
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 270 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 97 bp overlap
BRD2 1 dataset
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 174 bp overlap
BRD4 2 datasets
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 277 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 231 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 185 bp overlap
DDX21 3 datasets
ChIP A-375 GSE128080.DDX21.A-375 328 bp overlap
ChIP A-375_1726 GSE128080.DDX21.A-375_1726 168 bp overlap
ChIP A-375_1726plus GSE128080.DDX21.A-375_1726plus 300 bp overlap
DMRTA1 3 datasets
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 3 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
DMRTC2 1 dataset
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
ESR1 2 datasets
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 265 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 270 bp overlap
FOXA1 5 datasets
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 107 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 187 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 143 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 191 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 132 bp overlap
HCFC1 3 datasets
ChIP GM12878 ENCSR514VAY.HCFC1.GM12878 116 bp overlap
ChIP MCF-7 ENCFF595ZTV 365 bp overlap
ChIP MCF-7 ENCSR697CUP.HCFC1.MCF-7 322 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 116 bp overlap
HSF1 3 datasets
Motif DE_12h DE_12h-HSF1_MA0486.2 13 bp overlap
Motif ES_0h ES_0h-HSF1_MA0486.2 13 bp overlap
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 252 bp overlap
HSF2 2 datasets
Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap
Motif ES_0h ES_0h-HSF2_MA0770.1 13 bp overlap
HSF4 2 datasets
Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap
Motif ES_0h ES_0h-HSF4_MA0771.1 13 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 266 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 92 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 240 bp overlap
MYCN 1 dataset
ChIP prostate-cancer GSE117304.MYCN.prostate-cancer 169 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 370 bp overlap
OGT 1 dataset
ChIP LNCaP_OSMI-2 GSE112667.OGT.LNCaP_OSMI-2 277 bp overlap
PGR 2 datasets
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 370 bp overlap
ChIP breast_tumor_Male_30 GSE104399.PGR.breast_tumor_Male_30 195 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 120 bp overlap
PRDM1 1 dataset
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
Prdm5 1 dataset
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RORA 2 datasets
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
Motif ES_0h ES_0h-RORA_MA0072.2 11 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 4 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 196 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 150 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 196 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 352 bp overlap
SIX5 5 datasets
ChIP A-549 ENCSR000BRL.SIX5.A-549 162 bp overlap
ChIP GM12878 ENCFF766FEJ 237 bp overlap
ChIP GM12878 ENCSR000BJE.SIX5.GM12878 129 bp overlap
ChIP H1 ENCFF942SOJ 218 bp overlap
ChIP WA01 ENCSR000BIQ.SIX5.WA01 241 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX13 1 dataset
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
SOX2 1 dataset
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
STAT1 2 datasets
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT3 4 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
Six3 2 datasets
Motif DE_12h DE_12h-Six3_MA0631.2 11 bp overlap
Motif ES_0h ES_0h-Six3_MA0631.2 11 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Stat4 2 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
Stat5a 2 datasets
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap
Stat5a::Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5aStat5b_MA0519.2 9 bp overlap
Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap
Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
Thap11 2 datasets
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 176 bp overlap
ZNF143 13 datasets
ChIP CUTLL1 GSE29600.ZNF143.CUTLL1 260 bp overlap
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 264 bp overlap
ChIP HeLa GSE39263.ZNF143.HeLa 357 bp overlap
ChIP HeLa-S3 ENCSR000ECO.ZNF143.HeLa-S3 145 bp overlap
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 150 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 370 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 370 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 291 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 370 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 370 bp overlap
ChIP WTC11 ENCFF249JUK 370 bp overlap
ChIP WTC11 ENCFF249JUK 240 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCSR465XQW.ZNF217.MCF-7 246 bp overlap
ZNF317 2 datasets
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ZNF558 2 datasets
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
ZNF76 1 dataset
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
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