chr12 : 92,424,336 92,424,592
256 bp 50 TFs 0 linked genes
This 256 bp open chromatin element has no linked target genes and is bound by 50 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:92,419,336 – 92,429,592
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 256 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 177 bp overlap
BRD4 5 datasets
ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 171 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 164 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 74 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 252 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 158 bp overlap
CDK9 1 dataset
ChIP A-375 GSE128080.CDK9.A-375 135 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 90 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 256 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 240 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 138 bp overlap
FOS 3 datasets
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 112 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 215 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 252 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE46166.FOSL1.BT-549 74 bp overlap
FOSL2 4 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 142 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 91 bp overlap
ChIP A549 ENCFF195CES 187 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 220 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 99 bp overlap
ChIP DE DE-FOXA2-2 56 bp overlap
FOXB1 2 datasets
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXC1 2 datasets
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
Motif ES_0h ES_0h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
Motif ES_0h ES_0h-FOXC2_MA0846.2 11 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 115 bp overlap
Foxl2 2 datasets
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
JUN 6 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 256 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 223 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 128 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 253 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 162 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 124 bp overlap
JUNB 2 datasets
ChIP CD4 GSE116695.JUNB.CD4 88 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 146 bp overlap
JUND 2 datasets
ChIP H1 ENCFF010YXS 225 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 94 bp overlap
MAFF 2 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 185 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 181 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 221 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 256 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 161 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 256 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 221 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 256 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 256 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 256 bp overlap
ChIP hESC GSE18292.NANOG.hESC 213 bp overlap
NFIC 1 dataset
Motif DE_12h DE_12h-NFIC_MA1527.2 15 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA1528.2 14 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 156 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 10 datasets
ChIP GM23338 ENCFF333SNB 256 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 256 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 256 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 256 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 226 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 216 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 256 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 256 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 160 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 127 bp overlap
Pou5f1::Sox2 4 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 175 bp overlap
RELA 13 datasets
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 167 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 256 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 219 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 213 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 185 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 151 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 136 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 190 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 159 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 256 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 177 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 130 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 162 bp overlap
SMAD2 2 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA4 9 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 106 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 115 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 250 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 86 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 86 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 74 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 57 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 256 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 256 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 193 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 256 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 228 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 256 bp overlap
SOX13 1 dataset
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
SOX2 3 datasets
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
ChIP hESC GSE18292.SOX2.hESC 99 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 256 bp overlap
SOX9 1 dataset
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 126 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 173 bp overlap
Sox3 1 dataset
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
TBP 2 datasets
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
Motif ES_0h ES_0h-TBP_MA0108.3 7 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 245 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 171 bp overlap
Zfp809 1 dataset
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap