chr12 : 76,708,322 – 76,708,909
587 bp 80 TFs 0 linked genes
This 587 bp open chromatin element has no linked target genes and is bound by 80 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:76,703,322 – 76,713,909
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 239 bp overlap
ATF3 2 datasets
ChIP K562 ENCFF604FPV 72 bp overlap
ChIP K562 ENCFF921JQW 153 bp overlap
BARX1 2 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
BARX2 2 datasets
Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap
Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap
BRD4 2 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 209 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 205 bp overlap
BSX 2 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF584CTB 75 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 459 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 58 bp overlap
DLX1 2 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
Dlx3 2 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
ELK1::HOXB13 1 dataset
Motif DE_48h DE_48h-ELK1HOXB13_MA1932.2 15 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 239 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 124 bp overlap
FOS 1 dataset
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 71 bp overlap
FOXA1 1 dataset
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 113 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 537 bp overlap
ChIP DE DE-FOXA2-2 221 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
Motif DE_48h DE_48h-FOXA2_MA0047.4 8 bp overlap
FOXC1 2 datasets
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
Motif DE_48h DE_48h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
FOXD3 2 datasets
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap
FOXF1 2 datasets
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 188 bp overlap
ChIP GIST48_siETV1 GSE106624.FOXF1.GIST48_siETV1 130 bp overlap
FOXG1 2 datasets
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
Motif DE_48h DE_48h-FOXG1_MA0613.1 8 bp overlap
FOXK1 2 datasets
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
Motif DE_48h DE_48h-FOXK1_MA0852.3 7 bp overlap
FOXK2 2 datasets
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
Motif DE_48h DE_48h-FOXK2_MA1103.3 7 bp overlap
FOXL1 2 datasets
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
Motif DE_48h DE_48h-FOXL1_MA0033.2 7 bp overlap
FOXN3 2 datasets
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
FOXO4 2 datasets
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
Motif DE_48h DE_48h-FOXO4_MA0848.1 7 bp overlap
FOXO6 2 datasets
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
Motif DE_48h DE_48h-FOXO6_MA0849.1 7 bp overlap
FOXP2 2 datasets
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
FOXP3 2 datasets
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Motif DE_48h DE_48h-FOXP3_MA0850.1 7 bp overlap
FOXS1 2 datasets
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Motif DE_48h DE_48h-FOXS1_MA2118.1 8 bp overlap
Foxf1 2 datasets
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Motif DE_48h DE_48h-Foxf1_MA1606.2 7 bp overlap
Foxj2 2 datasets
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Motif DE_48h DE_48h-Foxj2_MA0614.1 8 bp overlap
Foxj3 2 datasets
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Motif DE_48h DE_48h-Foxj3_MA0851.2 9 bp overlap
Foxl2 2 datasets
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
Foxo1 2 datasets
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Motif DE_48h DE_48h-Foxo1_MA0480.3 7 bp overlap
Foxo3 2 datasets
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Motif DE_48h DE_48h-Foxo3_MA0157.4 7 bp overlap
Foxq1 2 datasets
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
GATA2 1 dataset
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 158 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 550 bp overlap
ChIP DE DE-GATA4-2 587 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 535 bp overlap
ChIP DE DE-GATA6-2 587 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 342 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 550 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 396 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 479 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 537 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 513 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 263 bp overlap
GBX2 2 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
HESX1 2 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
HMBOX1 1 dataset
ChIP HeLa GSE46237.HMBOX1.HeLa 205 bp overlap
HOXA7 2 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
HOXB13 3 datasets
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 332 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 111 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 128 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 297 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 292 bp overlap
LBX2 2 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 79 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 58 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MSX1 2 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 450 bp overlap
Msx3 2 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 196 bp overlap
NEUROG2 4 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 163 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 242 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 214 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 205 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 147 bp overlap
Nobox 2 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
PAX3 2 datasets
Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap
Motif DE_48h DE_48h-PAX3_MA0780.1 10 bp overlap
PHOX2B 2 datasets
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF748YVT 244 bp overlap
PROP1 2 datasets
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
Pax7 2 datasets
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
Motif DE_48h DE_48h-Pax7_MA0680.3 10 bp overlap
RAX 2 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 246 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 173 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 290 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 587 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 587 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 587 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 527 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 450 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 549 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 587 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 509 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 450 bp overlap
SOX18 2 datasets
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
Motif DE_48h DE_48h-SOX18_MA1563.2 8 bp overlap
SRY 2 datasets
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 70 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 212 bp overlap
Thap11 1 dataset
Motif DE_48h DE_48h-Thap11_MA1573.2 14 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 294 bp overlap
ZNF770 1 dataset
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 54 bp overlap
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