chr12 : 42,933,021 – 42,934,007
986 bp 64 TFs 0 linked genes
This 986 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:42,928,021 – 42,939,007
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
AR 2 datasets
ChIP prostate GSE56288.AR.prostate 224 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 259 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 229 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 69 bp overlap
BCL6 1 dataset
Motif DE_24h DE_24h-BCL6_MA0463.3 13 bp overlap
BRD4 6 datasets
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 652 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 414 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 443 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 342 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 285 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 367 bp overlap
CDX2 2 datasets
ChIP LS180_125 GSE31939.CDX2.LS180_125 193 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 226 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 241 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 384 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHGFP_96H GSE61944.ELF1.SK-N-MC_SHGFP_96H 305 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 491 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 583 bp overlap
ERG 14 datasets
ChIP RWPE-1 GSE114241.ERG.RWPE-1 377 bp overlap
ChIP VCaP GSE28950.ERG.VCaP 257 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 295 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 295 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 206 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 299 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 240 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 321 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 370 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 388 bp overlap
ChIP VCaP_SH3_DHT GSE79128.ERG.VCaP_SH3_DHT 253 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 622 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 332 bp overlap
ChIP aortic-endothelial-cell_D1 GSE139377.ERG.aortic-endothelial-cell_D1 161 bp overlap
ETV1 3 datasets
ChIP GIST GSE22441.ETV1.GIST 192 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 219 bp overlap
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 72 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 350 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 532 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 282 bp overlap
FLI1 1 dataset
ChIP SK-N-MC_SHGFP_48H GSE61944.FLI1.SK-N-MC_SHGFP_48H 278 bp overlap
GABPA 2 datasets
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 194 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 280 bp overlap
GATA5 1 dataset
Motif DE_24h DE_24h-GATA5_MA0766.3 8 bp overlap
GATA6 7 datasets
Motif DE_24h DE_24h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 986 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 986 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 986 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 837 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 986 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 986 bp overlap
Gata3 1 dataset
Motif DE_24h DE_24h-Gata3_MA0037.5 8 bp overlap
HOXB13 16 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 262 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 78 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 64 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 64 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 77 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.HOXB13.prostate-cancer_PDX_189-4 65 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 90 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 202 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 145 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 145 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 369 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 319 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 186 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 389 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 294 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 226 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 563 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 556 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 938 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 293 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 976 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 276 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 478 bp overlap
KLF7 2 datasets
ChIP HEK293 ENCFF599UKL 371 bp overlap
ChIP HEK293 ENCSR604VWJ.KLF7.HEK293 368 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 357 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 276 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 249 bp overlap
OVOL3 2 datasets
ChIP HEK293 ENCFF898STB 357 bp overlap
ChIP HEK293 ENCSR768LIO.OVOL3.HEK293 360 bp overlap
PGR 2 datasets
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 430 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 228 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 961 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF725QFT 227 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 525 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 558 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 303 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 549 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 218 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 537 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 986 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 982 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 947 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 986 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 959 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 169 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 986 bp overlap
STAT3 1 dataset
Motif DE_24h DE_24h-STAT3_MA0144.3 9 bp overlap
Stat5a 1 dataset
Motif DE_24h DE_24h-Stat5a_MA1624.2 9 bp overlap
Stat5a::Stat5b 1 dataset
Motif DE_24h DE_24h-Stat5aStat5b_MA0519.2 9 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 366 bp overlap
TCF7L2 1 dataset
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 400 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 552 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 513 bp overlap
TRPS1 1 dataset
Motif DE_24h DE_24h-TRPS1_MA1970.2 8 bp overlap
YY1 4 datasets
ChIP HEK293 ENCFF734SBY 391 bp overlap
ChIP HEK293 ENCSR859RAO.YY1.HEK293 298 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 597 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 935 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 311 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 583 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 471 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 645 bp overlap
ZNF320 1 dataset
ChIP HEK293 GSE76494.ZNF320.HEK293 157 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 394 bp overlap
ZNF518A 2 datasets
ChIP HEK293 ENCFF892ULS 441 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 415 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 357 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 418 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 609 bp overlap
ZNF580 1 dataset
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 475 bp overlap
ZNF596 1 dataset
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 174 bp overlap
ZNF610 1 dataset
ChIP HEK293 ENCSR691TXI.ZNF610.HEK293 454 bp overlap
ZNF626 1 dataset
ChIP HEK293 ENCFF633URH 321 bp overlap
ZNF768 1 dataset
Motif DE_24h DE_24h-ZNF768_MA1731.2 9 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 213 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 445 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 385 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 337 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 498 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 357 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 523 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 525 bp overlap
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