chr12 : 21,599,274 – 21,599,701
427 bp 46 TFs 1 linked gene
This 427 bp open chromatin element is linked to GYS2 and is bound by 46 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GYS2 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:21,594,274 – 21,604,701
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
AR 18 datasets
ChIP 22Rv1 GSE96652.AR.22Rv1 204 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 147 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 178 bp overlap
ChIP VCaP GSE148358.AR.VCaP 358 bp overlap
ChIP VCaP GSE32892.AR.VCaP 114 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 147 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 272 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 266 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 283 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 143 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 141 bp overlap
ChIP VCaP_R1881_10C30 GSE32892.AR.VCaP_R1881_10C30 112 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 115 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 121 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 198 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 173 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 160 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 221 bp overlap
ARID3A 1 dataset
ChIP GM12878 ENCSR725LYT.ARID3A.GM12878 149 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 145 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 190 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 171 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 427 bp overlap
BCOR 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 144 bp overlap
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 129 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF010ZUU 200 bp overlap
ChIP GM12878 ENCFF521IZR 232 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 175 bp overlap
CDK9 1 dataset
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 230 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 181 bp overlap
CREM 1 dataset
ChIP GM12878 ENCFF391UGE 301 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 427 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 350 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
ERF 3 datasets
ChIP VCaP GSE98809.ERF.VCaP 130 bp overlap
ChIP VCaP_DOX GSE98809.ERF.VCaP_DOX 169 bp overlap
ChIP VCaP_DOX GSE83650.ERF.VCaP_DOX 163 bp overlap
ERG 11 datasets
ChIP VCaP GSE28950.ERG.VCaP 153 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 289 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 289 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 151 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 385 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 230 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 391 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 168 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 236 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 170 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 179 bp overlap
ETV6 1 dataset
ChIP GM12878 GSE97661.ETV6.GM12878 232 bp overlap
EZH2 3 datasets
ChIP LNCaP GSE39459.EZH2.LNCaP 221 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 71 bp overlap
ChIP peripheral-blood-mononuclear-cell_mut GSE115772.EZH2.peripheral-blood-mononuclear-cell_mut 211 bp overlap
FLI1 1 dataset
ChIP SEM GSE117864.FLI1.SEM 171 bp overlap
FOXA1 3 datasets
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 132 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 109 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 132 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 424 bp overlap
ChIP DE DE-FOXA2-2 427 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 307 bp overlap
GATA2 2 datasets
ChIP TF1 GSE73207.GATA2.TF1 173 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 118 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 201 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 292 bp overlap
ChIP DE DE-GATA4-2 352 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 413 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 311 bp overlap
ChIP DE DE-GATA6-2 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 320 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 407 bp overlap
HDAC3 1 dataset
ChIP VCaP_DHAT_2H GSE28950.HDAC3.VCaP_DHAT_2H 150 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 115 bp overlap
HOXB13 5 datasets
ChIP 22Rv1 GSE96652.HOXB13.22Rv1 162 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 108 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.HOXB13.prostate-cancer_PDX_189-4 76 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 173 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 164 bp overlap
IRF4 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.IRF4.OCI-Ly3_SHCTR 263 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 151 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 217 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 220 bp overlap
MAX 2 datasets
ChIP P493-6 GSE36354.MAX.P493-6 192 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 174 bp overlap
MED1 1 dataset
ChIP VCaP GSE148358.MED1.VCaP 157 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 353 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 405 bp overlap
PAX5 10 datasets
ChIP GM12878 ENCFF482PUW 250 bp overlap
ChIP GM12878 ENCFF503GOV 298 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 240 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 215 bp overlap
ChIP GM12891 ENCFF490KVF 205 bp overlap
ChIP GM12891 ENCSR000BJH.PAX5.GM12891 190 bp overlap
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 114 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 305 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 239 bp overlap
ChIP OCI-Ly7 GSE69558.PAX5.OCI-Ly7 341 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 226 bp overlap
PGR 1 dataset
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 115 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 231 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 134 bp overlap
SPI1 5 datasets
ChIP GM12878 ENCFF134LCP 297 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 205 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 390 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 163 bp overlap
SPIB 2 datasets
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 265 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 300 bp overlap
TAL1 2 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 222 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 208 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 102 bp overlap
TBX21 3 datasets
ChIP GM12878 ENCFF951HUW 335 bp overlap
ChIP GM12878 ENCFF951HUW 134 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 382 bp overlap
TCF7 2 datasets
ChIP GM12878 ENCFF749DPM 98 bp overlap
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 288 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 141 bp overlap
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